Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC10.96□□□□□ -0.65
SMARCA4P51532 AC007386.1-201ENST00000455212 582 ntBASIC10.96□□□□□ -0.65
SMARCA4P51532 AC023245.1-201ENST00000468501 517 ntBASIC10.96□□□□□ -0.65
SMARCA4P51532 AC231760.1-201ENST00000498002 260 ntBASIC10.96□□□□□ -0.65
SMARCA4P51532 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC10.96□□□□□ -0.65
SMARCA4P51532 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC10.96□□□□□ -0.65
SMARCA4P51532 OR6M2P-201ENST00000529831 871 ntBASIC10.96□□□□□ -0.65
SMARCA4P51532 CASP5-209ENST00000531367 879 ntTSL 5 BASIC10.96□□□□□ -0.65
SMARCA4P51532 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC10.96□□□□□ -0.65
SMARCA4P51532 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC10.96□□□□□ -0.65
SMARCA4P51532 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC10.96□□□□□ -0.65
SMARCA4P51532 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC10.96□□□□□ -0.65
SMARCA4P51532 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMARCA4P51532 AC007342.5-201ENST00000571340 2142 ntBASIC10.96□□□□□ -0.66
SMARCA4P51532 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMARCA4P51532 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC10.96□□□□□ -0.66
SMARCA4P51532 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMARCA4P51532 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC10.96□□□□□ -0.66
SMARCA4P51532 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SMARCA4P51532 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMARCA4P51532 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SMARCA4P51532 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC10.95□□□□□ -0.66
SMARCA4P51532 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC10.95□□□□□ -0.66
SMARCA4P51532 FMO7P-201ENST00000436045 768 ntBASIC10.95□□□□□ -0.66
SMARCA4P51532 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC10.95□□□□□ -0.66
SMARCA4P51532 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC10.95□□□□□ -0.66
SMARCA4P51532 AC108043.1-201ENST00000512696 574 ntBASIC10.95□□□□□ -0.66
SMARCA4P51532 AP001496.3-201ENST00000580230 913 ntBASIC10.95□□□□□ -0.66
SMARCA4P51532 OR7A11P-201ENST00000597719 953 ntBASIC10.95□□□□□ -0.66
SMARCA4P51532 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SMARCA4P51532 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SMARCA4P51532 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC10.95□□□□□ -0.66
SMARCA4P51532 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMARCA4P51532 EML5-201ENST00000380664 5910 ntTSL 5 BASIC10.95□□□□□ -0.66
SMARCA4P51532 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC10.95□□□□□ -0.66
SMARCA4P51532 AC114728.1-201ENST00000488289 483 ntBASIC10.95□□□□□ -0.66
SMARCA4P51532 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC10.95□□□□□ -0.66
SMARCA4P51532 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC10.95□□□□□ -0.66
SMARCA4P51532 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC10.95□□□□□ -0.66
SMARCA4P51532 OR7A1P-201ENST00000601206 970 ntBASIC10.95□□□□□ -0.66
SMARCA4P51532 AC141002.1-201ENST00000607025 279 ntBASIC10.95□□□□□ -0.66
SMARCA4P51532 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC10.95□□□□□ -0.66
SMARCA4P51532 AL132640.3-201ENST00000630473 177 ntBASIC10.95□□□□□ -0.66
SMARCA4P51532 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SMARCA4P51532 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SMARCA4P51532 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC10.94□□□□□ -0.66
SMARCA4P51532 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC10.94□□□□□ -0.66
SMARCA4P51532 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SMARCA4P51532 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SMARCA4P51532 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC10.94□□□□□ -0.66
SMARCA4P51532 CCNB1IP1P1-201ENST00000428976 839 ntBASIC10.94□□□□□ -0.66
SMARCA4P51532 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC10.94□□□□□ -0.66
SMARCA4P51532 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC10.94□□□□□ -0.66
SMARCA4P51532 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC10.94□□□□□ -0.66
SMARCA4P51532 AC092967.1-201ENST00000449016 481 ntBASIC10.94□□□□□ -0.66
SMARCA4P51532 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC10.94□□□□□ -0.66
SMARCA4P51532 AC024587.1-201ENST00000505925 2157 ntBASIC10.94□□□□□ -0.66
SMARCA4P51532 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC10.94□□□□□ -0.66
SMARCA4P51532 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMARCA4P51532 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC10.94□□□□□ -0.66
SMARCA4P51532 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC10.94□□□□□ -0.66
SMARCA4P51532 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC10.94□□□□□ -0.66
SMARCA4P51532 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC10.94□□□□□ -0.66
SMARCA4P51532 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SMARCA4P51532 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 SNORA74A-201ENST00000364089 198 ntBASIC10.93□□□□□ -0.66
SMARCA4P51532 CYCSP51-201ENST00000443545 318 ntBASIC10.93□□□□□ -0.66
SMARCA4P51532 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 AP000662.1-201ENST00000530952 487 ntBASIC10.93□□□□□ -0.66
SMARCA4P51532 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC10.93□□□□□ -0.66
SMARCA4P51532 AC044860.2-201ENST00000561005 179 ntBASIC10.93□□□□□ -0.66
SMARCA4P51532 FO393422.1-201ENST00000603908 708 ntBASIC10.93□□□□□ -0.66
SMARCA4P51532 AC139493.1-201ENST00000604368 397 ntBASIC10.93□□□□□ -0.66
SMARCA4P51532 CASC19-222ENST00000641321 1173 ntBASIC10.93□□□□□ -0.66
SMARCA4P51532 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
SMARCA4P51532 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms