Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC090651.1-201ENST00000567865 634 ntBASIC6.65□□□□□ -1.34
SLC1A1P43005 RN7SL32P-201ENST00000580514 281 ntBASIC6.65□□□□□ -1.34
SLC1A1P43005 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SLC1A1P43005 PCA3_2.1-201ENST00000612507 409 ntBASIC6.65□□□□□ -1.34
SLC1A1P43005 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SLC1A1P43005 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SLC1A1P43005 AC073365.1-203ENST00000641055 1992 ntBASIC6.65□□□□□ -1.34
SLC1A1P43005 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SLC1A1P43005 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SLC1A1P43005 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
SLC1A1P43005 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.65□□□□□ -1.35
SLC1A1P43005 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
SLC1A1P43005 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.65□□□□□ -1.35
SLC1A1P43005 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC089998.1-201ENST00000548575 3141 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.64□□□□□ -1.35
SLC1A1P43005 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC1A1P43005 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SLC1A1P43005 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.64□□□□□ -1.35
SLC1A1P43005 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SLC1A1P43005 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AP003385.1-201ENST00000426387 893 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC1A1P43005 RN7SL655P-201ENST00000486087 298 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AL133399.1-201ENST00000527476 298 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AP004607.5-201ENST00000532034 217 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC009729.1-201ENST00000548873 1133 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 NIFKP4-201ENST00000567275 1192 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 AC133552.4-201ENST00000576103 676 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC1A1P43005 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC073046.2-201ENST00000604756 527 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 MIR7159-201ENST00000620587 66 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 MAPK10-261ENST00000641050 3109 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 USP9YP3-201ENST00000434481 1766 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
SLC1A1P43005 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC1A1P43005 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC1A1P43005 AC013268.3-201ENST00000262716 2324 ntBASIC6.64□□□□□ -1.35
SLC1A1P43005 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC1A1P43005 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
SLC1A1P43005 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC1A1P43005 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC1A1P43005 RNA5SP514-201ENST00000363717 111 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 RNU1-84P-201ENST00000365447 164 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.63□□□□□ -1.35
SLC1A1P43005 RN7SKP221-201ENST00000410420 301 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 CCNT2P1-201ENST00000423082 1315 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 ELOBP4-201ENST00000423418 296 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.63□□□□□ -1.35
SLC1A1P43005 SLAMF6P1-201ENST00000451067 602 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AC128716.1-201ENST00000475129 166 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 RPL5P33-201ENST00000487833 905 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AC018645.1-201ENST00000505003 109 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC1A1P43005 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.63□□□□□ -1.35
SLC1A1P43005 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.63□□□□□ -1.35
SLC1A1P43005 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.63□□□□□ -1.35
SLC1A1P43005 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.63□□□□□ -1.35
SLC1A1P43005 SNORA81.2-201ENST00000516868 170 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 IGHV4-55-201ENST00000520889 368 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 RPA2P3-201ENST00000533268 770 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.63□□□□□ -1.35
SLC1A1P43005 CHEK2P2-201ENST00000554701 672 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 AC007494.1-201ENST00000562293 760 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC1A1P43005 RN7SL657P-201ENST00000582431 293 ntBASIC6.63□□□□□ -1.35
SLC1A1P43005 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.63□□□□□ -1.35
SLC1A1P43005 AL589863.1-201ENST00000595383 631 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms