Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA1P35221 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA1P35221 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.79□□□□□ -1.32
CTNNA1P35221 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CTNNA1P35221 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.79□□□□□ -1.32
CTNNA1P35221 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA1P35221 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.79□□□□□ -1.32
CTNNA1P35221 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA1P35221 MAPK10-261ENST00000641050 3109 ntBASIC6.79□□□□□ -1.32
CTNNA1P35221 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA1P35221 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA1P35221 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA1P35221 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 AC126474.2-201ENST00000623268 1750 ntBASIC6.78□□□□□ -1.32
CTNNA1P35221 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CTNNA1P35221 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CTNNA1P35221 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA1P35221 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA1P35221 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA1P35221 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.78□□□□□ -1.32
CTNNA1P35221 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.78□□□□□ -1.32
CTNNA1P35221 AC105420.1-201ENST00000504389 582 ntBASIC6.78□□□□□ -1.32
CTNNA1P35221 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.78□□□□□ -1.32
CTNNA1P35221 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.78□□□□□ -1.32
CTNNA1P35221 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.78□□□□□ -1.32
CTNNA1P35221 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CTNNA1P35221 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.78□□□□□ -1.32
CTNNA1P35221 RN7SL208P-201ENST00000577964 296 ntBASIC6.78□□□□□ -1.32
CTNNA1P35221 RN7SL131P-201ENST00000579043 256 ntBASIC6.78□□□□□ -1.32
CTNNA1P35221 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA1P35221 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA1P35221 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA1P35221 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA1P35221 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA1P35221 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA1P35221 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CTNNA1P35221 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA1P35221 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CTNNA1P35221 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CTNNA1P35221 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA1P35221 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.32
CTNNA1P35221 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.32
CTNNA1P35221 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CTNNA1P35221 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CTNNA1P35221 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
CTNNA1P35221 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.77□□□□□ -1.33
CTNNA1P35221 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTNNA1P35221 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.77□□□□□ -1.33
CTNNA1P35221 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.77□□□□□ -1.33
CTNNA1P35221 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTNNA1P35221 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CTNNA1P35221 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTNNA1P35221 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.77□□□□□ -1.33
CTNNA1P35221 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.77□□□□□ -1.33
CTNNA1P35221 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CTNNA1P35221 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CTNNA1P35221 RNA5SP382-201ENST00000363355 112 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 RNA5SP355-201ENST00000365317 135 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CTNNA1P35221 RN7SKP117-201ENST00000410175 264 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.77□□□□□ -1.33
CTNNA1P35221 CYP4F30P-202ENST00000420048 405 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 CLCN3P1-201ENST00000423965 1017 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.77□□□□□ -1.33
CTNNA1P35221 GAPDHP75-201ENST00000433910 943 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 LDHAP2-201ENST00000437325 985 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AL592114.2-201ENST00000440142 532 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AL121578.2-201ENST00000448797 447 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.77□□□□□ -1.33
CTNNA1P35221 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.77□□□□□ -1.33
CTNNA1P35221 SUMO2P4-201ENST00000504193 276 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AC131392.1-201ENST00000506490 633 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.77□□□□□ -1.33
CTNNA1P35221 IGKV1D-22-201ENST00000518953 324 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.77□□□□□ -1.33
CTNNA1P35221 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.77□□□□□ -1.33
CTNNA1P35221 HNRNPCP8-201ENST00000528764 888 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.77□□□□□ -1.33
CTNNA1P35221 HMGN2P47-201ENST00000559378 272 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AC234775.3-201ENST00000564612 656 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.77□□□□□ -1.33
CTNNA1P35221 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.77□□□□□ -1.33
CTNNA1P35221 SNORD96A-201ENST00000606577 79 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AC127071.2-201ENST00000623293 527 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 AC009120.7-201ENST00000623452 780 ntBASIC6.77□□□□□ -1.33
CTNNA1P35221 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.77□□□□□ -1.33
CTNNA1P35221 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTNNA1P35221 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms