Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC097381.3-201ENST00000608962 462 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 MIR6889-201ENST00000613185 59 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.33□□□□□ -1.08
ERCC3P19447 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 TRIM53CP-201ENST00000531490 1354 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.33□□□□□ -1.08
ERCC3P19447 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 HSP90AA2P-201ENST00000530115 2196 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
ERCC3P19447 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC092111.2-201ENST00000611627 1414 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 RNY3P9-201ENST00000384727 106 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AL355375.1-201ENST00000405686 392 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 UBE2V1P11-201ENST00000411559 285 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC8.32□□□□□ -1.08
ERCC3P19447 RPS26P13-201ENST00000419030 330 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 MTCO2P21-201ENST00000419780 677 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AL593856.1-201ENST00000419949 805 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 SLC4A1APP1-201ENST00000419995 602 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 DSTNP5-201ENST00000427921 523 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 RPL12P28-201ENST00000430852 489 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 PUDPP2-201ENST00000431423 643 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 MTCYBP31-201ENST00000438855 1122 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.32□□□□□ -1.08
ERCC3P19447 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 AP001207.2-201ENST00000519490 539 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 CARSP2-201ENST00000520688 277 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AP001636.2-201ENST00000525517 696 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.32□□□□□ -1.08
ERCC3P19447 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.32□□□□□ -1.08
ERCC3P19447 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.32□□□□□ -1.08
ERCC3P19447 ULK4P2-202ENST00000564187 492 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC106734.1-201ENST00000568646 663 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC113368.1-201ENST00000603736 382 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC087894.3-201ENST00000623682 349 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AC019226.2-201ENST00000625973 424 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 OR2AH1P-202ENST00000641232 2744 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.32□□□□□ -1.08
ERCC3P19447 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 AC092821.2-201ENST00000545710 2042 ntBASIC8.32□□□□□ -1.08
ERCC3P19447 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.32□□□□□ -1.08
ERCC3P19447 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ERCC3P19447 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.31□□□□□ -1.08
ERCC3P19447 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.31□□□□□ -1.08
ERCC3P19447 MFSD8-220ENST00000641243 1422 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 OR5M2P-202ENST00000641241 4242 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
ERCC3P19447 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.31□□□□□ -1.08
ERCC3P19447 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
ERCC3P19447 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
ERCC3P19447 RNA5SP53-201ENST00000391299 120 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms