Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC007068.2-201ENST00000543168 395 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AL132640.2-202ENST00000559732 614 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 RN7SL208P-201ENST00000577964 296 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 WDR45BP1-201ENST00000583470 1029 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AL021368.3-201ENST00000607119 578 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC093635.1-201ENST00000609028 555 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 RNA5SP35-201ENST00000391257 129 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 RPL5P20-201ENST00000403848 896 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 RPSAP44-201ENST00000406712 884 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 RN7SKP129-201ENST00000410288 299 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 RPS21P1-201ENST00000434479 247 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC099340.1-201ENST00000475247 599 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 RN7SL37P-201ENST00000490461 307 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 RPL5P14-201ENST00000494197 878 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC106800.3-201ENST00000511389 308 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC008429.4-201ENST00000521201 182 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC002069.2-201ENST00000603580 883 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 DIMT1P1-201ENST00000603970 763 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AL136097.3-201ENST00000611097 505 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC013489.3-201ENST00000623274 517 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC061999.1-201ENST00000624454 177 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 OR5G5P-204ENST00000627642 621 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC073488.9-201ENST00000631601 754 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AP000550.3-201ENST00000637734 379 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 USP9YP3-201ENST00000434481 1766 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 KYNUP3-201ENST00000574386 1341 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 AC023632.6-201ENST00000624338 2177 ntBASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC28BQ9BUN5 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 PPBPP2-201ENST00000513150 1362 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 MIR99A-201ENST00000384906 81 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 OSTCP2-201ENST00000437956 444 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 RPS27AP3-201ENST00000453803 454 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms