Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
RNF144AP50876 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
RNF144AP50876 SND1-IT1-201ENST00000623342 2481 ntBASIC7.71□□□□□ -1.17
RNF144AP50876 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RNF144AP50876 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
RNF144AP50876 AC007614.2-201ENST00000569877 1851 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 HSPD1P7-201ENST00000447985 1686 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AL353807.3-201ENST00000500626 2505 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC108463.3-201ENST00000603748 1482 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RNF144AP50876 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RNF144AP50876 SNORA4.1-201ENST00000364263 144 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 RNA5SP78-201ENST00000364622 118 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 RN7SKP133-201ENST00000364845 340 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 Y_RNA.295-201ENST00000364918 102 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 SNORA73A-201ENST00000364938 206 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RNF144AP50876 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 MORF4L1P1-201ENST00000404582 967 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC064862.3-201ENST00000411435 571 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC006455.7-201ENST00000422502 392 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 WRBP1-201ENST00000423352 334 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 AL035458.1-201ENST00000433096 585 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 RPL15P1-201ENST00000439981 600 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC092170.1-201ENST00000440211 356 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC7.71□□□□□ -1.18
RNF144AP50876 RPL23AP35-201ENST00000451906 501 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC096915.1-201ENST00000456185 512 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 RPL5P24-201ENST00000463742 885 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 RN7SL77P-201ENST00000473332 294 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC079841.1-201ENST00000481228 950 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 TPT1P5-201ENST00000511433 521 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 OR7E85P-201ENST00000512164 985 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 AP000445.1-201ENST00000526692 741 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 KCTD9P4-201ENST00000526766 1166 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC7.71□□□□□ -1.18
RNF144AP50876 OR4A7P-201ENST00000531463 910 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AP003072.1-201ENST00000531740 145 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 NPIPB14P-203ENST00000532298 987 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC018653.2-201ENST00000540190 238 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AL352979.3-201ENST00000553515 247 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC090971.3-201ENST00000557871 1041 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 AL157394.1-201ENST00000562983 1224 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 ULK4P2-202ENST00000564187 492 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AL023284.4-201ENST00000564248 374 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC010650.1-201ENST00000567559 494 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF144AP50876 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC008751.1-201ENST00000600438 342 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 AC019193.2-201ENST00000610012 634 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC069209.1-201ENST00000619282 651 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC079684.1-201ENST00000621405 437 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AP003122.6-201ENST00000623831 495 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 AC016866.3-201ENST00000624037 714 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 OR5G5P-204ENST00000627642 621 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RNF144AP50876 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF144AP50876 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 MAPK10-279ENST00000641157 2449 ntBASIC7.71□□□□□ -1.18
RNF144AP50876 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
RNF144AP50876 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms