Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC022784.5-201ENST00000522241 437 ntBASIC7.26□□□□□ -1.25
CIITAP33076 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.26□□□□□ -1.25
CIITAP33076 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.26□□□□□ -1.25
CIITAP33076 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.26□□□□□ -1.25
CIITAP33076 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.26□□□□□ -1.25
CIITAP33076 AC009779.8-202ENST00000607990 932 ntBASIC7.26□□□□□ -1.25
CIITAP33076 AC010809.3-201ENST00000621310 641 ntBASIC7.26□□□□□ -1.25
CIITAP33076 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.26□□□□□ -1.25
CIITAP33076 AC022905.1-201ENST00000503430 3048 ntBASIC7.26□□□□□ -1.25
CIITAP33076 AP002833.3-201ENST00000625075 2265 ntBASIC7.26□□□□□ -1.25
CIITAP33076 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.26□□□□□ -1.25
CIITAP33076 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CIITAP33076 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.26□□□□□ -1.25
CIITAP33076 AL136984.1-201ENST00000607611 1893 ntBASIC7.26□□□□□ -1.25
CIITAP33076 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.25□□□□□ -1.25
CIITAP33076 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.25□□□□□ -1.25
CIITAP33076 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CIITAP33076 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.25□□□□□ -1.25
CIITAP33076 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CIITAP33076 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 RN7SKP77-201ENST00000363261 353 ntBASIC7.25□□□□□ -1.25
CIITAP33076 RN7SKP171-201ENST00000364417 303 ntBASIC7.25□□□□□ -1.25
CIITAP33076 YWHAZP4-201ENST00000392459 708 ntBASIC7.25□□□□□ -1.25
CIITAP33076 AL157702.1-201ENST00000398764 426 ntBASIC7.25□□□□□ -1.25
CIITAP33076 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.25□□□□□ -1.25
CIITAP33076 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.25□□□□□ -1.25
CIITAP33076 AC099782.1-201ENST00000425889 474 ntBASIC7.25□□□□□ -1.25
CIITAP33076 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.25□□□□□ -1.25
CIITAP33076 CLNS1AP1-201ENST00000435954 682 ntBASIC7.25□□□□□ -1.25
CIITAP33076 EMC3-AS1-205ENST00000438698 534 ntBASIC7.25□□□□□ -1.25
CIITAP33076 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.25□□□□□ -1.25
CIITAP33076 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 NPM1P27-201ENST00000502784 830 ntBASIC7.25□□□□□ -1.25
CIITAP33076 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.25□□□□□ -1.25
CIITAP33076 COX6B1P4-201ENST00000519826 484 ntBASIC7.25□□□□□ -1.25
CIITAP33076 AP004607.6-201ENST00000525033 1202 ntBASIC7.25□□□□□ -1.25
CIITAP33076 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.25□□□□□ -1.25
CIITAP33076 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.25□□□□□ -1.25
CIITAP33076 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.25□□□□□ -1.25
CIITAP33076 AL589863.1-201ENST00000595383 631 ntBASIC7.25□□□□□ -1.25
CIITAP33076 SNORA74.4-201ENST00000607595 199 ntBASIC7.25□□□□□ -1.25
CIITAP33076 AC087821.1-201ENST00000623639 567 ntBASIC7.25□□□□□ -1.25
CIITAP33076 AL132640.3-201ENST00000630473 177 ntBASIC7.25□□□□□ -1.25
CIITAP33076 AL596275.2-207ENST00000641188 675 ntBASIC7.25□□□□□ -1.25
CIITAP33076 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.25□□□□□ -1.25
CIITAP33076 CASC19-246ENST00000641625 1606 ntBASIC7.25□□□□□ -1.25
CIITAP33076 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CIITAP33076 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.25□□□□□ -1.25
CIITAP33076 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CIITAP33076 CUBNP3-201ENST00000457461 1784 ntBASIC7.25□□□□□ -1.25
CIITAP33076 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CIITAP33076 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CIITAP33076 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.25□□□□□ -1.25
CIITAP33076 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CIITAP33076 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CIITAP33076 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.25□□□□□ -1.25
CIITAP33076 AC105235.1-201ENST00000623208 1816 ntBASIC7.24□□□□□ -1.25
CIITAP33076 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 CYP2G2P-201ENST00000594920 1485 ntBASIC7.24□□□□□ -1.25
CIITAP33076 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 PPBPP2-201ENST00000513150 1362 ntBASIC7.24□□□□□ -1.25
CIITAP33076 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 AL359885.1-201ENST00000415786 903 ntBASIC7.24□□□□□ -1.25
CIITAP33076 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.24□□□□□ -1.25
CIITAP33076 VN1R20P-201ENST00000425215 966 ntBASIC7.24□□□□□ -1.25
CIITAP33076 AC097721.1-201ENST00000427150 1253 ntBASIC7.24□□□□□ -1.25
CIITAP33076 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.24□□□□□ -1.25
CIITAP33076 AC068522.1-201ENST00000482895 345 ntBASIC7.24□□□□□ -1.25
CIITAP33076 KHDC1P1-201ENST00000511053 508 ntBASIC7.24□□□□□ -1.25
CIITAP33076 RN7SKP183-201ENST00000517169 324 ntBASIC7.24□□□□□ -1.25
CIITAP33076 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.24□□□□□ -1.25
CIITAP33076 TRAV11-201ENST00000539512 339 ntBASIC7.24□□□□□ -1.25
CIITAP33076 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.24□□□□□ -1.25
CIITAP33076 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC7.24□□□□□ -1.25
CIITAP33076 AC009729.1-201ENST00000548873 1133 ntBASIC7.24□□□□□ -1.25
CIITAP33076 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms