Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
PTPN1P18031 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.24□□□□□ -1.25
PTPN1P18031 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.24□□□□□ -1.25
PTPN1P18031 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PTPN1P18031 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.23□□□□□ -1.25
PTPN1P18031 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
PTPN1P18031 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 RNU6-650P-201ENST00000365658 111 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 RNU6-40P-201ENST00000384254 107 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PTPN1P18031 RNA5SP474-201ENST00000391234 90 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.23□□□□□ -1.25
PTPN1P18031 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
PTPN1P18031 VN1R51P-201ENST00000411675 945 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.23□□□□□ -1.25
PTPN1P18031 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 SPATA20P1-201ENST00000423089 438 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 SETP8-201ENST00000435341 628 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 PSMD8P1-201ENST00000436275 769 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AL121578.2-201ENST00000448797 447 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 RPL31P11-202ENST00000454082 372 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 RN7SL70P-201ENST00000478322 302 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.23□□□□□ -1.25
PTPN1P18031 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.23□□□□□ -1.25
PTPN1P18031 RN7SKP265-201ENST00000516448 223 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AC113191.1-201ENST00000517759 403 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 SOX5P1-201ENST00000524155 1127 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 OSBPL9P3-201ENST00000534523 595 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.23□□□□□ -1.25
PTPN1P18031 OR5BK1P-201ENST00000550421 823 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.23□□□□□ -1.25
PTPN1P18031 CHEK2P2-201ENST00000554701 672 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.23□□□□□ -1.25
PTPN1P18031 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.23□□□□□ -1.25
PTPN1P18031 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 AC098935.2-201ENST00000604222 466 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 PCA3_2.1-201ENST00000612507 409 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 AC009159.2-201ENST00000617603 606 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AC095038.2-201ENST00000621464 1070 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AL138693.1-201ENST00000622219 129 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 AL450226.2-201ENST00000622913 439 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.23□□□□□ -1.25
PTPN1P18031 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.23□□□□□ -1.25
PTPN1P18031 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.23□□□□□ -1.25
PTPN1P18031 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.23□□□□□ -1.25
PTPN1P18031 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 ENO1P4-201ENST00000416471 1785 ntBASIC7.23□□□□□ -1.25
PTPN1P18031 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.23□□□□□ -1.25
PTPN1P18031 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PTPN1P18031 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PTPN1P18031 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PTPN1P18031 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.22□□□□□ -1.25
PTPN1P18031 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.22□□□□□ -1.25
PTPN1P18031 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PTPN1P18031 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
PTPN1P18031 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PTPN1P18031 AC004014.2-201ENST00000623718 5122 ntBASIC7.22□□□□□ -1.25
PTPN1P18031 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.22□□□□□ -1.25
PTPN1P18031 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PTPN1P18031 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PTPN1P18031 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.22□□□□□ -1.25
PTPN1P18031 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PTPN1P18031 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.22□□□□□ -1.25
PTPN1P18031 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PTPN1P18031 SNORD115-48-201ENST00000364764 76 ntBASIC7.22□□□□□ -1.25
PTPN1P18031 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.22□□□□□ -1.25
PTPN1P18031 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PTPN1P18031 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms