Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSX3Q99909 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX3Q99909 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX3Q99909 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC067942.1-201ENST00000488045 1493 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSX3Q99909 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC006511.2-201ENST00000388966 660 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 MIR541-201ENST00000401360 84 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 VN1R66P-201ENST00000412929 916 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC234781.4-201ENST00000419384 244 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX3Q99909 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC016908.1-201ENST00000442571 1219 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 RN7SL492P-201ENST00000460700 295 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 RPL17P2-201ENST00000491913 451 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX3Q99909 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.66□□□□□ -1.5
SSX3Q99909 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX3Q99909 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC068408.1-201ENST00000577406 1144 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX3Q99909 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSX3Q99909 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC106782.7-201ENST00000624024 418 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 AC133555.5-201ENST00000624430 418 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSX3Q99909 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX3Q99909 AC104837.1-201ENST00000444644 1587 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SSX3Q99909 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSX3Q99909 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSX3Q99909 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SSX3Q99909 CLCA3P-203ENST00000490028 2781 ntBASIC5.66□□□□□ -1.5
SSX3Q99909 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSX3Q99909 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX3Q99909 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX3Q99909 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SSX3Q99909 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX3Q99909 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
SSX3Q99909 AC009220.2-201ENST00000489759 1751 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 AC024651.2-201ENST00000562480 2098 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 AC232271.1-201ENST00000602455 2715 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.5
SSX3Q99909 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 CUL4AP1-201ENST00000514750 1863 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX3Q99909 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX3Q99909 AL359715.1-201ENST00000404330 555 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX3Q99909 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX3Q99909 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX3Q99909 AL672212.1-201ENST00000422246 400 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 EIF4A1P2-201ENST00000422633 1220 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 AC007365.2-201ENST00000428806 458 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 MYL6P3-201ENST00000436904 432 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX3Q99909 CTSLP6-201ENST00000458273 1002 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 RPS26P11-201ENST00000463445 348 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 RPS26P6-201ENST00000475156 348 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX3Q99909 CARSP2-201ENST00000520688 277 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.65□□□□□ -1.5
SSX3Q99909 OR4A13P-201ENST00000529316 942 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 OR4A1P-201ENST00000532342 920 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 AP002004.1-206ENST00000532441 876 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 HMGN1P26-201ENST00000558737 303 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX3Q99909 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX3Q99909 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX3Q99909 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 QTRT1P1-201ENST00000604344 1078 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.65□□□□□ -1.5
SSX3Q99909 AC099654.15-201ENST00000639802 509 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms