Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 AC091492.1-201ENST00000419844 272 ntBASIC4.41□□□□□ -1.7
RPL39P62891 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.41□□□□□ -1.7
RPL39P62891 RPL12P16-201ENST00000431098 498 ntBASIC4.41□□□□□ -1.7
RPL39P62891 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC4.41□□□□□ -1.7
RPL39P62891 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPL39P62891 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 AC008429.4-201ENST00000521201 182 ntBASIC4.41□□□□□ -1.7
RPL39P62891 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 AC011193.2-201ENST00000582638 367 ntBASIC4.41□□□□□ -1.7
RPL39P62891 WDR45BP1-201ENST00000583470 1029 ntBASIC4.41□□□□□ -1.7
RPL39P62891 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 AC074141.1-201ENST00000588129 2995 ntBASIC4.41□□□□□ -1.7
RPL39P62891 MIR132-201ENST00000591554 101 ntBASIC4.41□□□□□ -1.7
RPL39P62891 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 AC245052.7-201ENST00000601161 359 ntBASIC4.41□□□□□ -1.7
RPL39P62891 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 AC004890.3-201ENST00000605566 1095 ntBASIC4.41□□□□□ -1.7
RPL39P62891 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 AC000095.2-202ENST00000637415 154 ntBASIC4.41□□□□□ -1.7
RPL39P62891 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPL39P62891 AC114876.1-201ENST00000490962 1366 ntBASIC4.4□□□□□ -1.7
RPL39P62891 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.4□□□□□ -1.7
RPL39P62891 AC239868.2-201ENST00000564237 4527 ntBASIC4.4□□□□□ -1.7
RPL39P62891 AC020656.2-201ENST00000613291 5309 ntBASIC4.4□□□□□ -1.7
RPL39P62891 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC4.4□□□□□ -1.7
RPL39P62891 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC4.4□□□□□ -1.7
RPL39P62891 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPL39P62891 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RPL39P62891 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPL39P62891 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPL39P62891 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.4□□□□□ -1.7
RPL39P62891 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RPL39P62891 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.4□□□□□ -1.71
RPL39P62891 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RPL39P62891 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RPL39P62891 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC4.4□□□□□ -1.71
RPL39P62891 MEG8-201ENST00000414488 800 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC4.4□□□□□ -1.71
RPL39P62891 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.4□□□□□ -1.71
RPL39P62891 AC000089.1-201ENST00000424559 801 ntBASIC4.4□□□□□ -1.71
RPL39P62891 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RPL39P62891 ATP5LP4-201ENST00000434169 307 ntBASIC4.4□□□□□ -1.71
RPL39P62891 RPS21P1-201ENST00000434479 247 ntBASIC4.4□□□□□ -1.71
RPL39P62891 RPL22P11-201ENST00000434894 385 ntBASIC4.4□□□□□ -1.71
RPL39P62891 OSTCP2-201ENST00000437956 444 ntBASIC4.4□□□□□ -1.71
RPL39P62891 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RPL39P62891 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 AC073594.1-201ENST00000462065 364 ntBASIC4.4□□□□□ -1.71
RPL39P62891 RN7SL456P-201ENST00000469290 295 ntBASIC4.4□□□□□ -1.71
RPL39P62891 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 RPS16P9-201ENST00000477220 427 ntBASIC4.4□□□□□ -1.71
RPL39P62891 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 B3GNTL1P1-201ENST00000509174 289 ntBASIC4.4□□□□□ -1.71
RPL39P62891 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 AP005902.2-201ENST00000518393 307 ntBASIC4.4□□□□□ -1.71
RPL39P62891 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.4□□□□□ -1.71
RPL39P62891 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 ACER3-213ENST00000533873 929 ntTSL 2 BASIC4.4□□□□□ -1.71
RPL39P62891 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.4□□□□□ -1.71
RPL39P62891 AC027229.1-201ENST00000583887 253 ntBASIC4.4□□□□□ -1.71
RPL39P62891 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.4□□□□□ -1.71
RPL39P62891 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 AC093388.1-201ENST00000609166 430 ntBASIC4.4□□□□□ -1.71
RPL39P62891 AC006924.1-201ENST00000610750 559 ntBASIC4.4□□□□□ -1.71
RPL39P62891 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.4□□□□□ -1.71
RPL39P62891 AP001153.1-201ENST00000641024 338 ntBASIC4.4□□□□□ -1.71
RPL39P62891 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.4□□□□□ -1.71
RPL39P62891 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.4□□□□□ -1.71
RPL39P62891 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.4□□□□□ -1.71
RPL39P62891 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPL39P62891 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 475.7 ms