Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 AC063952.1-203ENST00000634410 658 ntBASIC7□□□□□ -1.29
COL6A2P12110 FRG1DP-201ENST00000635586 771 ntBASIC7□□□□□ -1.29
COL6A2P12110 AL354702.2-202ENST00000641481 890 ntBASIC7□□□□□ -1.29
COL6A2P12110 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 AL359694.2-201ENST00000567753 1615 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC139426.3-201ENST00000605648 2059 ntBASIC7□□□□□ -1.29
COL6A2P12110 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7□□□□□ -1.29
COL6A2P12110 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7□□□□□ -1.29
COL6A2P12110 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7□□□□□ -1.29
COL6A2P12110 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL6A2P12110 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 RNA5SP301-201ENST00000362537 121 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL6A2P12110 MIR541-201ENST00000401360 84 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 RN7SKP254-201ENST00000410685 310 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 RN7SKP85-201ENST00000411349 318 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 SEPT7P8-201ENST00000413308 775 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 OR52N3P-201ENST00000413417 934 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 AL357632.1-201ENST00000426688 643 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 SETD6P1-201ENST00000444575 317 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC020779.1-201ENST00000478757 796 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC087672.1-201ENST00000479876 766 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 RN7SL306P-201ENST00000492941 296 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 SNX18P25-201ENST00000510539 758 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.99□□□□□ -1.29
COL6A2P12110 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 AL591767.3-201ENST00000554632 525 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC023824.3-201ENST00000569003 562 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 MTND3P13-201ENST00000574391 343 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AP000919.1-202ENST00000581139 1264 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC113368.1-201ENST00000603736 382 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC027271.1-201ENST00000610270 610 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 FAM27E3-202ENST00000614611 340 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC021755.4-201ENST00000616620 456 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC139792.2-201ENST00000624218 587 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
COL6A2P12110 AC006927.2-201ENST00000639256 389 ntBASIC6.99□□□□□ -1.29
COL6A2P12110 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL6A2P12110 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL6A2P12110 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.99□□□□□ -1.29
COL6A2P12110 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.99□□□□□ -1.29
COL6A2P12110 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL6A2P12110 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.98□□□□□ -1.29
COL6A2P12110 CYP2G2P-201ENST00000594920 1485 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 AC034229.2-201ENST00000566945 2508 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms