Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC5.92□□□□□ -1.46
SPTA1P02549 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.92□□□□□ -1.46
SPTA1P02549 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC5.92□□□□□ -1.46
SPTA1P02549 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SPTA1P02549 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.92□□□□□ -1.46
SPTA1P02549 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 RPS3AP2-201ENST00000407190 754 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.92□□□□□ -1.46
SPTA1P02549 SOCS5P1-201ENST00000440415 949 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 AC096922.1-201ENST00000461635 651 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC5.92□□□□□ -1.46
SPTA1P02549 AC093763.2-201ENST00000505334 1223 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 LDHAP1-201ENST00000509421 992 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.92□□□□□ -1.46
SPTA1P02549 AC112191.2-201ENST00000522428 333 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.92□□□□□ -1.46
SPTA1P02549 AP003115.1-201ENST00000569849 463 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.92□□□□□ -1.46
SPTA1P02549 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SPTA1P02549 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
SPTA1P02549 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC5.92□□□□□ -1.46
SPTA1P02549 AC235565.1-201ENST00000456962 1325 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.92□□□□□ -1.46
SPTA1P02549 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SPTA1P02549 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 AC007342.5-201ENST00000571340 2142 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.92□□□□□ -1.46
SPTA1P02549 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.92□□□□□ -1.46
SPTA1P02549 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
SPTA1P02549 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 RNU1-150P-201ENST00000362491 162 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 SNORA56-201ENST00000383966 129 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 AL354794.2-201ENST00000424795 1248 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 GAPDHP51-201ENST00000426454 1000 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 AL445665.1-202ENST00000452436 324 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 AC093283.1-201ENST00000565306 1075 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 AC104785.1-201ENST00000603220 588 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 AL096800.1-201ENST00000405326 893 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 AL353662.1-201ENST00000439099 327 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.91□□□□□ -1.46
SPTA1P02549 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 RN7SL727P-201ENST00000482164 296 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 PFN2-217ENST00000498307 556 ntTSL 4 BASIC5.91□□□□□ -1.46
SPTA1P02549 ATP5LP3-201ENST00000514223 304 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 RNA5SP34-201ENST00000516887 130 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 HIGD1AP5-201ENST00000529959 259 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.91□□□□□ -1.46
SPTA1P02549 AC044860.2-201ENST00000561005 179 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SPTA1P02549 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SPTA1P02549 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SPTA1P02549 AL355377.1-201ENST00000621125 1653 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SPTA1P02549 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 AC079949.2-201ENST00000617117 2933 ntBASIC5.91□□□□□ -1.46
SPTA1P02549 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SPTA1P02549 SNORA70.3-201ENST00000365075 132 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 AC006511.2-201ENST00000388966 660 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.9□□□□□ -1.46
SPTA1P02549 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms