Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC004656.1-201ENST00000568479 4951 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 RNA5SP478-201ENST00000364657 115 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 RN7SKP189-201ENST00000365042 330 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 RNU6-673P-201ENST00000365084 104 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AL121977.1-201ENST00000401636 979 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 UBE2V1P14-201ENST00000415815 558 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC007562.1-201ENST00000421819 517 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC023274.2-201ENST00000445264 521 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 UBE2V2P4-201ENST00000447495 259 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AL022319.1-201ENST00000458183 1167 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC126615.1-201ENST00000470084 630 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 IGKV1D-22-201ENST00000518953 324 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC136777.2-201ENST00000522979 358 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC008429.2-201ENST00000523057 864 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC090651.1-201ENST00000567865 634 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 MIR5705-201ENST00000579870 89 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 MIR665-201ENST00000635949 72 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC140479.4-205ENST00000636339 820 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC123769.1-201ENST00000530992 3192 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 RNA5SP176-201ENST00000390956 110 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 LDHAP5-201ENST00000394996 622 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 PDCL3P5-201ENST00000398028 722 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AL929472.1-201ENST00000417484 429 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC092651.1-201ENST00000426110 312 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AL590399.2-201ENST00000427536 309 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 RN7SL314P-201ENST00000490735 292 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 NPM1P28-201ENST00000492269 840 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 RN7SL445P-201ENST00000495609 293 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 GAPDHP38-201ENST00000503632 1002 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AP001646.2-201ENST00000528645 1156 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 OR4C1P-201ENST00000530880 937 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms