Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.11□□□□□ -1.27
VCPP55072 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.11□□□□□ -1.27
VCPP55072 RPL12P12-201ENST00000424633 501 ntBASIC7.11□□□□□ -1.27
VCPP55072 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.11□□□□□ -1.27
VCPP55072 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.11□□□□□ -1.27
VCPP55072 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.11□□□□□ -1.27
VCPP55072 RARRES2P3-201ENST00000457739 473 ntBASIC7.11□□□□□ -1.27
VCPP55072 AC083806.1-201ENST00000468934 316 ntBASIC7.11□□□□□ -1.27
VCPP55072 RN7SL654P-201ENST00000479178 292 ntBASIC7.11□□□□□ -1.27
VCPP55072 COX6B1P4-201ENST00000519826 484 ntBASIC7.11□□□□□ -1.27
VCPP55072 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.11□□□□□ -1.27
VCPP55072 SETP17-201ENST00000534163 817 ntBASIC7.11□□□□□ -1.27
VCPP55072 MIR3614-201ENST00000581261 86 ntBASIC7.11□□□□□ -1.27
VCPP55072 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.11□□□□□ -1.27
VCPP55072 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.11□□□□□ -1.27
VCPP55072 AC011445.2-201ENST00000599274 173 ntBASIC7.11□□□□□ -1.27
VCPP55072 AC012175.1-201ENST00000603755 531 ntBASIC7.11□□□□□ -1.27
VCPP55072 AL035410.2-201ENST00000604963 864 ntBASIC7.11□□□□□ -1.27
VCPP55072 AL513218.1-201ENST00000606527 391 ntBASIC7.11□□□□□ -1.27
VCPP55072 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
VCPP55072 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
VCPP55072 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 LCOR-201ENST00000286067 4542 ntBASIC7.11□□□□□ -1.27
VCPP55072 AL136531.3-201ENST00000624378 3658 ntBASIC7.11□□□□□ -1.27
VCPP55072 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.11□□□□□ -1.27
VCPP55072 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.11□□□□□ -1.27
VCPP55072 CDY10P-201ENST00000452415 1567 ntBASIC7.11□□□□□ -1.27
VCPP55072 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.11□□□□□ -1.27
VCPP55072 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VCPP55072 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VCPP55072 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
VCPP55072 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
VCPP55072 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.1□□□□□ -1.27
VCPP55072 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
VCPP55072 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VCPP55072 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.1□□□□□ -1.27
VCPP55072 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.1□□□□□ -1.27
VCPP55072 AL590128.1-201ENST00000433407 286 ntBASIC7.1□□□□□ -1.27
VCPP55072 AC110749.1-201ENST00000462007 357 ntBASIC7.1□□□□□ -1.27
VCPP55072 AC115223.1-201ENST00000466377 870 ntBASIC7.1□□□□□ -1.27
VCPP55072 RN7SL216P-201ENST00000471607 298 ntBASIC7.1□□□□□ -1.27
VCPP55072 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.1□□□□□ -1.27
VCPP55072 AC099340.1-201ENST00000475247 599 ntBASIC7.1□□□□□ -1.27
VCPP55072 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.1□□□□□ -1.27
VCPP55072 RN7SL177P-201ENST00000476596 299 ntBASIC7.1□□□□□ -1.27
VCPP55072 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.1□□□□□ -1.27
VCPP55072 AC087752.2-201ENST00000521219 281 ntBASIC7.1□□□□□ -1.27
VCPP55072 DIMT1P1-201ENST00000603970 763 ntBASIC7.1□□□□□ -1.27
VCPP55072 CYCSP1-201ENST00000604815 315 ntBASIC7.1□□□□□ -1.27
VCPP55072 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.1□□□□□ -1.27
VCPP55072 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VCPP55072 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.1□□□□□ -1.27
VCPP55072 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
VCPP55072 KARSP1-201ENST00000451871 1752 ntBASIC7.1□□□□□ -1.27
VCPP55072 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
VCPP55072 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
VCPP55072 AC007406.5-201ENST00000570140 3170 ntBASIC7.1□□□□□ -1.27
VCPP55072 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VCPP55072 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.1□□□□□ -1.27
VCPP55072 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VCPP55072 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
VCPP55072 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.09□□□□□ -1.27
VCPP55072 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 MAPK10-357ENST00000641831 2858 ntBASIC7.09□□□□□ -1.27
VCPP55072 AL359195.2-201ENST00000623657 4412 ntBASIC7.09□□□□□ -1.27
VCPP55072 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
VCPP55072 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 VN1R20P-201ENST00000425215 966 ntBASIC7.09□□□□□ -1.27
VCPP55072 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.09□□□□□ -1.27
VCPP55072 RN7SL413P-201ENST00000482700 297 ntBASIC7.09□□□□□ -1.27
VCPP55072 AC068522.1-201ENST00000482895 345 ntBASIC7.09□□□□□ -1.27
VCPP55072 AC023818.1-201ENST00000498379 384 ntBASIC7.09□□□□□ -1.27
VCPP55072 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.09□□□□□ -1.27
VCPP55072 OR4A13P-201ENST00000529316 942 ntBASIC7.09□□□□□ -1.27
VCPP55072 AP000662.1-201ENST00000530952 487 ntBASIC7.09□□□□□ -1.27
VCPP55072 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.09□□□□□ -1.27
VCPP55072 AC140063.1-201ENST00000541343 259 ntBASIC7.09□□□□□ -1.27
VCPP55072 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.09□□□□□ -1.27
VCPP55072 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms