Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.81□□□□□ -1.16
CNGA1P29973 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
CNGA1P29973 AL117339.4-201ENST00000608335 7063 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.81□□□□□ -1.16
CNGA1P29973 AMZ2P2-201ENST00000406819 1057 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AL353626.3-201ENST00000413399 657 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AC244452.1-201ENST00000413798 141 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.81□□□□□ -1.16
CNGA1P29973 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.81□□□□□ -1.16
CNGA1P29973 RN7SL379P-201ENST00000479912 293 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AC016687.1-201ENST00000482574 353 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.81□□□□□ -1.16
CNGA1P29973 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.81□□□□□ -1.16
CNGA1P29973 AC087752.2-201ENST00000521219 281 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 TDGP1-201ENST00000543961 1229 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.81□□□□□ -1.16
CNGA1P29973 AC025283.1-201ENST00000572039 734 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.81□□□□□ -1.16
CNGA1P29973 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.81□□□□□ -1.16
CNGA1P29973 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 AC098483.2-201ENST00000603158 454 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AC135803.1-201ENST00000608748 565 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AC004241.2-201ENST00000614562 444 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AC006249.1-201ENST00000621223 471 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 AL359742.1-201ENST00000622497 540 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 SPATA31C2-201ENST00000324915 3777 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CNGA1P29973 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.81□□□□□ -1.16
CNGA1P29973 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNGA1P29973 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.81□□□□□ -1.16
CNGA1P29973 TPTE2P2-201ENST00000403471 1466 ntBASIC7.81□□□□□ -1.16
CNGA1P29973 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.8□□□□□ -1.16
CNGA1P29973 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 OR7A2P-201ENST00000304105 930 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CNGA1P29973 STAG3L4-201ENST00000352103 530 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 RNU6-697P-201ENST00000363348 107 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 SNORA27.3-201ENST00000364937 134 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 RNA5SP279-201ENST00000365513 117 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 AC013410.2-201ENST00000422627 201 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 LSM3P3-201ENST00000436601 306 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.8□□□□□ -1.16
CNGA1P29973 TXNP2-201ENST00000443918 295 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC135999.1-201ENST00000478962 479 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 AC112484.3-201ENST00000505910 329 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 RNA5SP278-201ENST00000517055 102 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC134349.2-201ENST00000535136 910 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC079315.1-201ENST00000602952 623 ntBASIC7.8□□□□□ -1.16
CNGA1P29973 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.8□□□□□ -1.16
CNGA1P29973 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.8□□□□□ -1.16
CNGA1P29973 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.8□□□□□ -1.16
CNGA1P29973 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNGA1P29973 AC006600.2-201ENST00000624834 2506 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms