Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.83□□□□□ -1.48
FREM3P0C091 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.83□□□□□ -1.48
FREM3P0C091 AL591926.1-201ENST00000620542 217 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.83□□□□□ -1.48
FREM3P0C091 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FREM3P0C091 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.83□□□□□ -1.48
FREM3P0C091 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
FREM3P0C091 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.82□□□□□ -1.48
FREM3P0C091 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
FREM3P0C091 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.82□□□□□ -1.48
FREM3P0C091 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.82□□□□□ -1.48
FREM3P0C091 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 OR3D1P-201ENST00000438288 955 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 EEF1B2P3-201ENST00000447718 678 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 MGAT2P1-201ENST00000449718 797 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 AC144530.1-201ENST00000452862 555 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 AL139156.3-201ENST00000454802 394 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.82□□□□□ -1.48
FREM3P0C091 COX6B1P4-201ENST00000519826 484 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 TRIM77BP-201ENST00000524985 1119 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 NPIPB14P-203ENST00000532298 987 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.82□□□□□ -1.48
FREM3P0C091 AC090888.3-201ENST00000558917 509 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.82□□□□□ -1.48
FREM3P0C091 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.82□□□□□ -1.48
FREM3P0C091 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.82□□□□□ -1.48
FREM3P0C091 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.82□□□□□ -1.48
FREM3P0C091 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.82□□□□□ -1.48
FREM3P0C091 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
FREM3P0C091 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.82□□□□□ -1.48
FREM3P0C091 PSMC1P6-201ENST00000477233 1319 ntBASIC5.82□□□□□ -1.48
FREM3P0C091 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
FREM3P0C091 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.82□□□□□ -1.48
FREM3P0C091 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.82□□□□□ -1.48
FREM3P0C091 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC5.82□□□□□ -1.48
FREM3P0C091 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
FREM3P0C091 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FREM3P0C091 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 OR2M1P-201ENST00000318104 951 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
FREM3P0C091 CXADRP1-201ENST00000398098 1095 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.81□□□□□ -1.48
FREM3P0C091 AC094019.1-201ENST00000434678 472 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 HMGN1P2-201ENST00000445197 310 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.81□□□□□ -1.48
FREM3P0C091 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC5.81□□□□□ -1.48
FREM3P0C091 BIN2P1-201ENST00000504996 1530 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.81□□□□□ -1.48
FREM3P0C091 AC096754.1-201ENST00000508904 818 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.81□□□□□ -1.48
FREM3P0C091 AC024405.1-201ENST00000532521 1042 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 HSPD1P4-201ENST00000547203 1702 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AC026826.3-201ENST00000561747 158 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.81□□□□□ -1.48
FREM3P0C091 AL445647.2-201ENST00000615170 130 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 CXADRP3-202ENST00000617265 1100 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.81□□□□□ -1.48
FREM3P0C091 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.81□□□□□ -1.48
FREM3P0C091 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.81□□□□□ -1.48
FREM3P0C091 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
FREM3P0C091 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.81□□□□□ -1.48
FREM3P0C091 AC006213.6-201ENST00000623722 4179 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 DNM1P47-203ENST00000571780 12667 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 AC018717.1-201ENST00000457712 1505 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms