Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 IGKV1D-22-201ENST00000518953 324 ntBASIC7.06□□□□□ -1.28
TPM1P09493 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM1P09493 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM1P09493 AC069240.2-201ENST00000550242 609 ntBASIC7.06□□□□□ -1.28
TPM1P09493 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 OR4H6P-201ENST00000563771 921 ntBASIC7.06□□□□□ -1.28
TPM1P09493 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM1P09493 WDR45BP1-201ENST00000583470 1029 ntBASIC7.06□□□□□ -1.28
TPM1P09493 AP001267.4-201ENST00000602598 545 ntBASIC7.06□□□□□ -1.28
TPM1P09493 AC093635.1-201ENST00000609028 555 ntBASIC7.06□□□□□ -1.28
TPM1P09493 AC093388.1-201ENST00000609166 430 ntBASIC7.06□□□□□ -1.28
TPM1P09493 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.06□□□□□ -1.28
TPM1P09493 AL121782.1-201ENST00000611242 413 ntBASIC7.06□□□□□ -1.28
TPM1P09493 AC135068.11-201ENST00000636378 921 ntBASIC7.06□□□□□ -1.28
TPM1P09493 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 ZNF101P1-201ENST00000435701 1720 ntBASIC7.06□□□□□ -1.28
TPM1P09493 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM1P09493 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.06□□□□□ -1.28
TPM1P09493 TRIM53CP-201ENST00000531490 1354 ntBASIC7.06□□□□□ -1.28
TPM1P09493 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM1P09493 AL137141.1-201ENST00000624622 4836 ntBASIC7.06□□□□□ -1.28
TPM1P09493 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
TPM1P09493 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
TPM1P09493 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.05□□□□□ -1.28
TPM1P09493 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TPM1P09493 AC004656.1-201ENST00000568479 4951 ntBASIC7.05□□□□□ -1.28
TPM1P09493 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TPM1P09493 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TPM1P09493 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TPM1P09493 RNA5SP321-201ENST00000362722 111 ntBASIC7.05□□□□□ -1.28
TPM1P09493 RN7SKP1-201ENST00000365525 307 ntBASIC7.05□□□□□ -1.28
TPM1P09493 RNU1-56P-201ENST00000391303 164 ntBASIC7.05□□□□□ -1.28
TPM1P09493 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
TPM1P09493 NPM1P31-201ENST00000399021 764 ntBASIC7.05□□□□□ -1.28
TPM1P09493 AL136100.1-201ENST00000407696 330 ntBASIC7.05□□□□□ -1.28
TPM1P09493 RPL23AP85-201ENST00000421838 433 ntBASIC7.05□□□□□ -1.28
TPM1P09493 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.05□□□□□ -1.28
TPM1P09493 AL022237.1-201ENST00000446663 358 ntBASIC7.05□□□□□ -1.28
TPM1P09493 RPL7AP71-201ENST00000451120 739 ntBASIC7.05□□□□□ -1.28
TPM1P09493 AC103563.5-201ENST00000455643 364 ntBASIC7.05□□□□□ -1.28
TPM1P09493 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.05□□□□□ -1.28
TPM1P09493 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.05□□□□□ -1.28
TPM1P09493 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.05□□□□□ -1.28
TPM1P09493 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.05□□□□□ -1.28
TPM1P09493 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC7.05□□□□□ -1.28
TPM1P09493 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.05□□□□□ -1.28
TPM1P09493 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.05□□□□□ -1.28
TPM1P09493 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.05□□□□□ -1.28
TPM1P09493 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.05□□□□□ -1.28
TPM1P09493 MIR7854-201ENST00000620068 65 ntBASIC7.05□□□□□ -1.28
TPM1P09493 AL035425.4-201ENST00000624509 1063 ntBASIC7.05□□□□□ -1.28
TPM1P09493 AC119674.1-217ENST00000641942 1086 ntBASIC7.05□□□□□ -1.28
TPM1P09493 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 AC100810.3-201ENST00000633189 2240 ntBASIC7.05□□□□□ -1.28
TPM1P09493 OR2A3P-202ENST00000641249 1776 ntBASIC7.05□□□□□ -1.28
TPM1P09493 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
TPM1P09493 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.05□□□□□ -1.28
TPM1P09493 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.05□□□□□ -1.28
TPM1P09493 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM1P09493 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
TPM1P09493 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 LDHAP5-201ENST00000394996 622 ntBASIC7.04□□□□□ -1.28
TPM1P09493 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 U3.43-201ENST00000410734 213 ntBASIC7.04□□□□□ -1.28
TPM1P09493 RN7SKP137-201ENST00000411074 307 ntBASIC7.04□□□□□ -1.28
TPM1P09493 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 CYP4F30P-202ENST00000420048 405 ntBASIC7.04□□□□□ -1.28
TPM1P09493 RPL7AP14-201ENST00000424041 802 ntBASIC7.04□□□□□ -1.28
TPM1P09493 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM1P09493 KATNBL1P2-201ENST00000433311 835 ntBASIC7.04□□□□□ -1.28
TPM1P09493 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM1P09493 RPL7L1P3-201ENST00000455249 689 ntBASIC7.04□□□□□ -1.28
TPM1P09493 AC236972.4-201ENST00000458091 963 ntBASIC7.04□□□□□ -1.28
TPM1P09493 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM1P09493 AC025271.1-201ENST00000485045 429 ntBASIC7.04□□□□□ -1.28
TPM1P09493 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM1P09493 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms