Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC090953.1-201ENST00000604305 1092 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 MRPL57P1-201ENST00000621486 265 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC093829.1-201ENST00000506662 1618 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 PSMC1P4-201ENST00000515236 1327 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AL022323.4-201ENST00000623980 13120 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AL033543.1-201ENST00000623440 13454 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 RNU1-5P-201ENST00000362684 144 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 RPS20P25-201ENST00000412447 352 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 RPL23AP85-201ENST00000421838 433 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AL596268.1-201ENST00000427910 1048 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 SNX18P26-201ENST00000458433 740 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC022415.1-202ENST00000486612 523 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC111000.5-201ENST00000506559 1178 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC090115.2-201ENST00000548060 883 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AL121579.2-201ENST00000555466 590 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC027796.1-201ENST00000575593 512 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 MIR5010-201ENST00000582846 120 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 RPL7AP69-201ENST00000595306 806 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC093635.1-201ENST00000609028 555 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AL132640.3-201ENST00000630473 177 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 AC135068.11-201ENST00000636378 921 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 LINC01616-201ENST00000561816 2280 ntBASIC6.7□□□□□ -1.34
PCDH9Q9HC56 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH9Q9HC56 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC011369.2-201ENST00000624423 1567 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 TMCC1P1-201ENST00000518897 1980 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC011815.2-201ENST00000618230 2021 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 RNA5SP140-201ENST00000364524 92 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 RPL5P20-201ENST00000403848 896 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 MIR1266-201ENST00000408125 84 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 RN7SKP161-201ENST00000411110 305 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 VN1R53P-201ENST00000429536 957 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 PSMD8P1-201ENST00000436275 769 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC234771.4-201ENST00000441416 730 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 GAPDHP33-201ENST00000443168 1013 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 UBBP5-201ENST00000446970 266 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 PPIAP32-201ENST00000449940 472 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms