Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AL512283.1-201ENST00000606756 1384 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC132219.2-201ENST00000624416 2327 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC010894.1-201ENST00000313760 361 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 RPL9P21-201ENST00000392269 505 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 USP9YP14-201ENST00000430663 563 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 NANOGP9-201ENST00000439890 892 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 FCF1P7-201ENST00000451185 558 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC105313.1-201ENST00000509121 353 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC117522.2-201ENST00000510049 657 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AP003049.1-201ENST00000529418 457 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 BNIP3P24-201ENST00000593398 557 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 OR7A8P-201ENST00000595427 913 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AL022161.1-201ENST00000604390 213 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AL035410.2-201ENST00000604963 864 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC012557.2-201ENST00000605919 418 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 CLUHP10-201ENST00000631979 980 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AL356118.1-201ENST00000635272 1078 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC068446.1-201ENST00000556425 1549 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 AC015871.3-201ENST00000618835 2261 ntBASIC7.1□□□□□ -1.27
CDK5RAP1Q96SZ6 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC022613.3-201ENST00000560740 1346 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 RNA5SP65-201ENST00000363166 119 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC009506.2-201ENST00000420635 840 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AL589794.1-201ENST00000424971 390 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AL034369.1-201ENST00000453808 477 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC139713.1-202ENST00000512366 460 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC117525.1-201ENST00000515228 503 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC084851.2-201ENST00000530377 364 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 DPPA3P2-201ENST00000553589 478 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AL591767.3-201ENST00000554632 525 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AL049838.1-201ENST00000563647 981 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 SNORA70D-201ENST00000578836 135 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC009303.3-201ENST00000591103 736 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AF129408.1-201ENST00000608767 431 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC079416.3-201ENST00000624479 549 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms