Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.81□□□□□ -1.16
RHBDL3P58872 RNA5SP418-201ENST00000515951 117 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 RNA5SP441-201ENST00000516809 88 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 AC006512.2-201ENST00000543250 486 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.81□□□□□ -1.16
RHBDL3P58872 AC008055.1-201ENST00000547032 609 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 AC005632.2-201ENST00000564271 828 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 RN7SL208P-201ENST00000577964 296 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 AL157899.1-201ENST00000604110 936 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 AC090953.1-201ENST00000604305 1092 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.81□□□□□ -1.16
RHBDL3P58872 SNORD91A-202ENST00000609620 191 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 AC020658.4-201ENST00000613987 684 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 AC005899.7-201ENST00000618199 588 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 AL391597.1-201ENST00000618707 694 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 AC073592.6-201ENST00000624271 415 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.81□□□□□ -1.16
RHBDL3P58872 LINC02495-203ENST00000636704 242 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.81□□□□□ -1.16
RHBDL3P58872 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.81□□□□□ -1.16
RHBDL3P58872 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.81□□□□□ -1.16
RHBDL3P58872 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
RHBDL3P58872 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AC009166.2-201ENST00000624410 2833 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RHBDL3P58872 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RHBDL3P58872 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AC004014.2-201ENST00000623718 5122 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 STAG3L4-201ENST00000352103 530 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 AL049697.3-201ENST00000406493 982 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 NACAP7-201ENST00000407371 609 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AC008753.1-201ENST00000423096 284 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 RPL5P10-201ENST00000445207 894 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 PFN1P8-201ENST00000497012 543 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 HMGN1P17-201ENST00000513734 295 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 ZNF519P4-201ENST00000514008 125 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 GLYATL1P2-202ENST00000588046 902 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 AC073046.2-201ENST00000604756 527 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 OR1N1-202ENST00000619659 939 ntBASIC7.8□□□□□ -1.16
RHBDL3P58872 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RHBDL3P58872 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.8□□□□□ -1.16
RHBDL3P58872 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.8□□□□□ -1.16
RHBDL3P58872 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 AC007485.2-201ENST00000623493 1667 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.79□□□□□ -1.16
RHBDL3P58872 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 AL589993.1-201ENST00000407450 2524 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.79□□□□□ -1.16
RHBDL3P58872 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms