Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PSMA6P1-201ENST00000400275 741 ntBASIC7.13□□□□□ -1.27
VCPP55072 PRELID1P1-201ENST00000403549 660 ntBASIC7.13□□□□□ -1.27
VCPP55072 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 RPL12P23-201ENST00000405880 490 ntBASIC7.13□□□□□ -1.27
VCPP55072 AL512422.1-201ENST00000407033 553 ntBASIC7.13□□□□□ -1.27
VCPP55072 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 IPPKP1-201ENST00000422501 768 ntBASIC7.13□□□□□ -1.27
VCPP55072 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.13□□□□□ -1.27
VCPP55072 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.13□□□□□ -1.27
VCPP55072 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.13□□□□□ -1.27
VCPP55072 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 RPS26P11-201ENST00000463445 348 ntBASIC7.13□□□□□ -1.27
VCPP55072 RPS26P6-201ENST00000475156 348 ntBASIC7.13□□□□□ -1.27
VCPP55072 H3F3AP5-201ENST00000475267 429 ntBASIC7.13□□□□□ -1.27
VCPP55072 AC117500.1-201ENST00000497352 755 ntBASIC7.13□□□□□ -1.27
VCPP55072 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.13□□□□□ -1.27
VCPP55072 AC106872.4-201ENST00000510050 523 ntBASIC7.13□□□□□ -1.27
VCPP55072 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.13□□□□□ -1.27
VCPP55072 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.13□□□□□ -1.27
VCPP55072 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.13□□□□□ -1.27
VCPP55072 AC051619.2-201ENST00000559063 397 ntBASIC7.13□□□□□ -1.27
VCPP55072 AL078601.3-201ENST00000573303 535 ntBASIC7.13□□□□□ -1.27
VCPP55072 PRELID3BP3-201ENST00000584963 545 ntBASIC7.13□□□□□ -1.27
VCPP55072 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.13□□□□□ -1.27
VCPP55072 AC091768.1-201ENST00000609258 930 ntBASIC7.13□□□□□ -1.27
VCPP55072 AC016590.3-201ENST00000611171 753 ntBASIC7.13□□□□□ -1.27
VCPP55072 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.13□□□□□ -1.27
VCPP55072 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.13□□□□□ -1.27
VCPP55072 AC093278.2-201ENST00000564956 2485 ntBASIC7.13□□□□□ -1.27
VCPP55072 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.13□□□□□ -1.27
VCPP55072 AC008957.3-201ENST00000624112 2242 ntBASIC7.13□□□□□ -1.27
VCPP55072 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.13□□□□□ -1.27
VCPP55072 AP000641.1-201ENST00000531988 1639 ntBASIC7.12□□□□□ -1.27
VCPP55072 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.12□□□□□ -1.27
VCPP55072 AC010329.1-201ENST00000593903 8328 ntBASIC7.12□□□□□ -1.27
VCPP55072 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 TMCC1P1-201ENST00000518897 1980 ntBASIC7.12□□□□□ -1.27
VCPP55072 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
VCPP55072 RN7SKP69-201ENST00000365390 305 ntBASIC7.12□□□□□ -1.27
VCPP55072 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 Z93019.1-201ENST00000416450 973 ntBASIC7.12□□□□□ -1.27
VCPP55072 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.12□□□□□ -1.27
VCPP55072 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.12□□□□□ -1.27
VCPP55072 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.12□□□□□ -1.27
VCPP55072 AC063943.2-201ENST00000495697 534 ntBASIC7.12□□□□□ -1.27
VCPP55072 AC093664.1-201ENST00000511779 289 ntBASIC7.12□□□□□ -1.27
VCPP55072 SNORA26.10-201ENST00000516427 141 ntBASIC7.12□□□□□ -1.27
VCPP55072 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.12□□□□□ -1.27
VCPP55072 AC124891.1-201ENST00000536322 519 ntBASIC7.12□□□□□ -1.27
VCPP55072 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.12□□□□□ -1.27
VCPP55072 AC005519.1-201ENST00000554490 601 ntBASIC7.12□□□□□ -1.27
VCPP55072 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.12□□□□□ -1.27
VCPP55072 AC023968.1-201ENST00000560719 475 ntBASIC7.12□□□□□ -1.27
VCPP55072 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.12□□□□□ -1.27
VCPP55072 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 OR1N1-202ENST00000619659 939 ntBASIC7.12□□□□□ -1.27
VCPP55072 AL109924.4-201ENST00000623089 670 ntBASIC7.12□□□□□ -1.27
VCPP55072 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
VCPP55072 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VCPP55072 AC062029.1-202ENST00000606164 3651 ntBASIC7.12□□□□□ -1.27
VCPP55072 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
VCPP55072 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
VCPP55072 PABPC1P8-201ENST00000452851 2086 ntBASIC7.12□□□□□ -1.27
VCPP55072 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
VCPP55072 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
VCPP55072 AL359263.1-201ENST00000441188 2796 ntBASIC7.11□□□□□ -1.27
VCPP55072 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VCPP55072 AL713922.1-201ENST00000416477 747 ntBASIC7.11□□□□□ -1.27
VCPP55072 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms