Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.39□□□□□ -1.07
ERCC3P19447 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.38□□□□□ -1.07
ERCC3P19447 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 RBPJP6-201ENST00000411556 1431 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ERCC3P19447 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.38□□□□□ -1.07
ERCC3P19447 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 OR56A4-201ENST00000330728 1209 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 RN7SKP184-201ENST00000362348 333 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 AL603865.2-201ENST00000401679 213 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 VPS26BP1-201ENST00000417155 755 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.38□□□□□ -1.07
ERCC3P19447 ZBTB8OSP2-201ENST00000423890 504 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 AL954705.1-201ENST00000435277 559 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 AC079193.1-201ENST00000460497 588 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 MTCO2P6-201ENST00000463134 685 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 RPS14P7-201ENST00000473701 448 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 RN7SL790P-201ENST00000474043 298 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.38□□□□□ -1.07
ERCC3P19447 RN7SL705P-201ENST00000481678 294 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 GCSHP1-201ENST00000512554 484 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 RNA5SP518-201ENST00000515957 119 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 IGLV1-62-201ENST00000518003 441 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC8.38□□□□□ -1.07
ERCC3P19447 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.38□□□□□ -1.07
ERCC3P19447 OR10V3P-201ENST00000525712 725 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 AP002004.1-206ENST00000532441 876 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 AC089984.3-201ENST00000552838 363 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 UBE2CP1-201ENST00000557130 554 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.38□□□□□ -1.07
ERCC3P19447 MIR4470-201ENST00000583453 72 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC8.38□□□□□ -1.07
ERCC3P19447 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.38□□□□□ -1.07
ERCC3P19447 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC8.38□□□□□ -1.07
ERCC3P19447 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ERCC3P19447 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC8.38□□□□□ -1.07
ERCC3P19447 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 MIR665-201ENST00000635949 72 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 MTND2P41-201ENST00000637599 773 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ERCC3P19447 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ERCC3P19447 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 AP003471.1-202ENST00000319051 1988 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ERCC3P19447 CR788268.1-201ENST00000603931 1809 ntBASIC8.38□□□□□ -1.07
ERCC3P19447 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ERCC3P19447 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC061975.7-201ENST00000592016 2692 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.37□□□□□ -1.07
ERCC3P19447 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
ERCC3P19447 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
ERCC3P19447 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
ERCC3P19447 MIR187-201ENST00000385062 109 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 RBBP4P4-201ENST00000398588 1289 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 CBX1P3-201ENST00000413296 527 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 XKRYP4-201ENST00000414395 483 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AL158825.1-201ENST00000414735 521 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 FAM183DP-201ENST00000421987 399 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC8.37□□□□□ -1.07
ERCC3P19447 ARF4P4-201ENST00000439608 520 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AC114928.1-201ENST00000446516 415 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC8.37□□□□□ -1.07
ERCC3P19447 XKRYP5-201ENST00000449659 483 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 GOT2P2-201ENST00000450663 1251 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC8.37□□□□□ -1.07
ERCC3P19447 RN7SL259P-201ENST00000478499 253 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.37□□□□□ -1.07
ERCC3P19447 MTND4LP2-201ENST00000502312 285 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms