Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HMGA1P17096 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGA1P17096 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 CUBNP3-201ENST00000457461 1784 ntBASIC6.62□□□□□ -1.35
HMGA1P17096 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGA1P17096 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGA1P17096 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HMGA1P17096 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HMGA1P17096 LYARP1-201ENST00000436977 1501 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGA1P17096 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGA1P17096 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 AL354854.1-201ENST00000455940 1363 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 AC092725.2-201ENST00000567658 1389 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGA1P17096 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HMGA1P17096 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
HMGA1P17096 AL050335.1-201ENST00000396909 869 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGA1P17096 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HMGA1P17096 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGA1P17096 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGA1P17096 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 HIGD1AP16-201ENST00000450986 258 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 BZW1P1-201ENST00000454901 1240 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 AC009963.3-201ENST00000458090 486 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 NPM1P27-201ENST00000502784 830 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 MTND6P8-201ENST00000503471 522 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 AC106800.3-201ENST00000511389 308 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGA1P17096 AP004609.2-201ENST00000532177 190 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGA1P17096 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGA1P17096 CYCSP38-201ENST00000559840 322 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGA1P17096 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGA1P17096 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGA1P17096 AC010998.3-201ENST00000613871 631 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
HMGA1P17096 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 HSPD1P9-201ENST00000420325 1636 ntBASIC6.61□□□□□ -1.35
HMGA1P17096 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGA1P17096 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGA1P17096 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGA1P17096 BRD7P1-201ENST00000557705 1915 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
HMGA1P17096 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGA1P17096 MAPK10-323ENST00000641493 3207 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGA1P17096 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGA1P17096 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGA1P17096 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGA1P17096 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGA1P17096 AC004386.1-201ENST00000393214 761 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 U3.43-201ENST00000410734 213 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGA1P17096 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGA1P17096 RBMY2AP-201ENST00000445405 1157 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 RBMY2CP-201ENST00000448575 1157 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 RBMY2DP-202ENST00000448881 1157 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 RBMY2BP-202ENST00000451071 1156 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 PPIAP7-201ENST00000454070 489 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGA1P17096 AP000620.1-201ENST00000527147 504 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGA1P17096 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGA1P17096 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGA1P17096 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGA1P17096 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGA1P17096 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGA1P17096 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.6□□□□□ -1.35
HMGA1P17096 AC108865.2-201ENST00000606881 432 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 AL591167.1-201ENST00000607321 456 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 AC015982.1-201ENST00000608113 465 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGA1P17096 AL365181.4-201ENST00000609800 547 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 AC092266.1-201ENST00000610958 165 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 AC022400.9-201ENST00000623633 273 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 AL132640.3-201ENST00000630473 177 ntBASIC6.6□□□□□ -1.35
HMGA1P17096 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGA1P17096 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.6□□□□□ -1.35
HMGA1P17096 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGA1P17096 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGA1P17096 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGA1P17096 LINC02035-201ENST00000610128 5476 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms