Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.02□□□□□ -1.28
COL6A2P12110 MFSD8-220ENST00000641243 1422 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL6A2P12110 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 ASNSP6-201ENST00000592770 1618 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AL596244.1-201ENST00000567068 3779 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL6A2P12110 MIR365B-201ENST00000362317 111 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 RPL12P1-201ENST00000374520 498 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.02□□□□□ -1.29
COL6A2P12110 RPL5P19-201ENST00000404228 893 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC017035.1-201ENST00000411999 1115 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 UBE2V1P9-201ENST00000414760 368 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC017104.2-201ENST00000417000 321 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.02□□□□□ -1.29
COL6A2P12110 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC115285.1-201ENST00000424879 736 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A2P12110 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC092647.3-201ENST00000443044 633 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A2P12110 GTF2F2P2-201ENST00000445825 721 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A2P12110 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A2P12110 TCEAL4P1-201ENST00000453620 588 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC018892.2-201ENST00000457656 693 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 RARRES2P3-201ENST00000457739 473 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 SNORA81.1-201ENST00000458922 177 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC104629.2-201ENST00000468627 598 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A2P12110 RPS17P11-201ENST00000474297 293 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 RN7SL338P-201ENST00000481467 293 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 EIF1P7-201ENST00000487533 337 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 RN7SL775P-201ENST00000498361 336 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC117522.2-201ENST00000510049 657 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 ASNSP4-201ENST00000511103 447 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC093770.1-201ENST00000511559 571 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.02□□□□□ -1.29
COL6A2P12110 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A2P12110 OR4A21P-201ENST00000532759 944 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.02□□□□□ -1.29
COL6A2P12110 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A2P12110 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A2P12110 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A2P12110 OR4F28P-201ENST00000559128 938 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC133569.1-201ENST00000564327 373 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 SNORA70D-201ENST00000578836 135 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 OOSP1P2-201ENST00000579644 351 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 OR4F8P-201ENST00000589943 937 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC104117.5-201ENST00000606195 547 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC018690.1-201ENST00000608144 626 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A2P12110 AC100847.1-201ENST00000611316 481 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC026951.2-201ENST00000613847 241 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AC011330.2-201ENST00000621680 635 ntBASIC7.02□□□□□ -1.29
COL6A2P12110 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A2P12110 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A2P12110 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL6A2P12110 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
COL6A2P12110 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A2P12110 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
COL6A2P12110 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.01□□□□□ -1.29
COL6A2P12110 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
COL6A2P12110 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 CCAT2-201ENST00000630920 1752 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 RNA5SP172-201ENST00000365061 118 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.01□□□□□ -1.29
COL6A2P12110 AC234772.1-201ENST00000377927 937 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.01□□□□□ -1.29
COL6A2P12110 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 RPS21P8-201ENST00000413365 247 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 PPIAP30-201ENST00000415473 519 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 NANOGP5-201ENST00000424456 877 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms