Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 MTCO1P22-201ENST00000604619 1360 ntBASIC6.04□□□□□ -1.44
SSX4O60224 AC025809.2-201ENST00000625085 1802 ntBASIC6.04□□□□□ -1.44
SSX4O60224 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SSX4O60224 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX4O60224 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX4O60224 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX4O60224 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
SSX4O60224 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.03□□□□□ -1.44
SSX4O60224 AP002370.1-201ENST00000528055 1602 ntBASIC6.03□□□□□ -1.44
SSX4O60224 TPTE2P2-201ENST00000403471 1466 ntBASIC6.03□□□□□ -1.44
SSX4O60224 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
SSX4O60224 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 AC092634.1-201ENST00000366505 199 ntBASIC6.03□□□□□ -1.44
SSX4O60224 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 AL050305.1-201ENST00000399993 1230 ntBASIC6.03□□□□□ -1.44
SSX4O60224 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX4O60224 Z82198.3-201ENST00000421145 199 ntBASIC6.03□□□□□ -1.44
SSX4O60224 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 AC064862.5-201ENST00000440618 334 ntBASIC6.03□□□□□ -1.44
SSX4O60224 BX005266.3-201ENST00000443013 1075 ntBASIC6.03□□□□□ -1.44
SSX4O60224 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 OR52E7P-201ENST00000452394 933 ntBASIC6.03□□□□□ -1.44
SSX4O60224 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 RN7SL649P-201ENST00000496974 275 ntBASIC6.03□□□□□ -1.44
SSX4O60224 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 AC112184.1-201ENST00000505179 312 ntBASIC6.03□□□□□ -1.44
SSX4O60224 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.03□□□□□ -1.44
SSX4O60224 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 OR4A6P-201ENST00000534364 970 ntBASIC6.03□□□□□ -1.44
SSX4O60224 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX4O60224 AC138207.8-204ENST00000579588 527 ntBASIC6.03□□□□□ -1.44
SSX4O60224 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 AC009303.3-201ENST00000591103 736 ntBASIC6.03□□□□□ -1.44
SSX4O60224 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX4O60224 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.03□□□□□ -1.44
SSX4O60224 AC104184.1-201ENST00000607513 721 ntBASIC6.03□□□□□ -1.44
SSX4O60224 MIR6780B-201ENST00000610307 79 ntBASIC6.03□□□□□ -1.44
SSX4O60224 AL157762.1-201ENST00000619612 415 ntBASIC6.03□□□□□ -1.44
SSX4O60224 OR1N1-202ENST00000619659 939 ntBASIC6.03□□□□□ -1.44
SSX4O60224 AC004943.1-203ENST00000624370 1074 ntBASIC6.03□□□□□ -1.44
SSX4O60224 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
SSX4O60224 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSX4O60224 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSX4O60224 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SSX4O60224 AC093278.2-201ENST00000564956 2485 ntBASIC6.03□□□□□ -1.44
SSX4O60224 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.03□□□□□ -1.44
SSX4O60224 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SSX4O60224 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.03□□□□□ -1.44
SSX4O60224 AL356361.1-201ENST00000400943 1459 ntBASIC6.02□□□□□ -1.44
SSX4O60224 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
SSX4O60224 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX4O60224 MAPK10-287ENST00000641217 3037 ntBASIC6.02□□□□□ -1.45
SSX4O60224 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 AC015799.1-201ENST00000622996 3122 ntBASIC6.02□□□□□ -1.45
SSX4O60224 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX4O60224 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SSX4O60224 RNU6-1055P-201ENST00000391085 107 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AL451046.1-201ENST00000406097 534 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AL033519.1-201ENST00000407266 307 ntBASIC6.02□□□□□ -1.45
SSX4O60224 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX4O60224 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX4O60224 FAM183DP-201ENST00000421987 399 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SSX4O60224 AC097523.2-201ENST00000435551 652 ntBASIC6.02□□□□□ -1.45
SSX4O60224 RPL12P49-201ENST00000441100 121 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC234771.4-201ENST00000441416 730 ntBASIC6.02□□□□□ -1.45
SSX4O60224 NPM1P9-201ENST00000453156 844 ntBASIC6.02□□□□□ -1.45
SSX4O60224 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 AC002075.1-201ENST00000457396 676 ntBASIC6.02□□□□□ -1.45
SSX4O60224 GAPDHP53-201ENST00000458397 924 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC128716.1-201ENST00000475129 166 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC009567.2-201ENST00000502989 349 ntBASIC6.02□□□□□ -1.45
SSX4O60224 MORF4L2P1-201ENST00000503761 858 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX4O60224 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms