Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC245452.2-201ENST00000435222 392 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 RPL31P11-202ENST00000454082 372 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC115223.1-201ENST00000466377 870 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC044810.1-201ENST00000480271 711 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 RPL23AP68-201ENST00000480924 445 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 RN7SL612P-201ENST00000497704 295 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC073581.1-201ENST00000519036 575 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 BTG1P1-201ENST00000540396 508 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC140063.1-201ENST00000541343 259 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC020914.7-201ENST00000594477 545 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 OR7A11P-201ENST00000597719 953 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC036176.3-201ENST00000602456 418 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 RPS4XP21-201ENST00000603814 750 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AL390877.1-201ENST00000605704 214 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC007620.3-201ENST00000608131 497 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AC017037.4-201ENST00000624526 826 ntBASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHMP4CQ96CF2 NEK2P4-201ENST00000425793 1329 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AL512310.3-201ENST00000547023 1335 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC025809.2-201ENST00000625085 1802 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AL449283.1-201ENST00000602631 3403 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 OR10D1P-201ENST00000355343 936 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 RNU6-891P-201ENST00000384280 111 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 RPEP4-201ENST00000437636 602 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 PMS2P9-201ENST00000441237 515 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 E2F6P3-201ENST00000441743 743 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 RPS4XP17-201ENST00000479057 754 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC023818.1-201ENST00000498379 384 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 RN7SL270P-201ENST00000579643 281 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AL008582.1-201ENST00000609612 442 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC006328.2-201ENST00000623198 397 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC127071.2-201ENST00000623293 527 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AC012005.2-201ENST00000624333 397 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 CLUHP10-201ENST00000631979 980 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 AL596244.1-201ENST00000567068 3779 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.03□□□□□ -1.12
CHMP4CQ96CF2 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms