Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 TNPO1P2-201ENST00000426249 2665 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC110716.2-201ENST00000563865 3945 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 RNU6-673P-201ENST00000365084 104 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 GTF3AP6-201ENST00000432585 986 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 COX4I1P2-201ENST00000447446 547 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 YRDCP3-201ENST00000456507 480 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC098818.1-201ENST00000478593 252 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 RPL29P23-201ENST00000486188 442 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 NPM1P27-201ENST00000502784 830 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 BMS1P16-201ENST00000556075 1147 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 WBP1LP12-201ENST00000604449 331 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC073046.2-201ENST00000604756 527 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AL591848.4-201ENST00000567832 3472 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AL359694.2-201ENST00000567753 1615 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AL021877.2-201ENST00000624442 10684 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 AC084782.1-201ENST00000564401 2465 ntBASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AL353743.3-201ENST00000442109 1468 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 RNA5SP485-201ENST00000365053 119 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 RNA5SP77-201ENST00000365394 120 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC121334.1-201ENST00000396414 802 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC003045.1-201ENST00000398779 713 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 RN7SKP281-201ENST00000410472 352 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 RNU4-64P-201ENST00000410795 131 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AL360013.1-201ENST00000419031 858 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC002127.1-201ENST00000421305 225 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC096632.2-201ENST00000438139 1239 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 RARRES2P3-201ENST00000457739 473 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC092824.1-201ENST00000483524 576 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 EIF4E2P2-201ENST00000492033 736 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 RNA5SP418-201ENST00000515951 117 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC026898.1-201ENST00000586404 571 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC011891.2-201ENST00000604949 397 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AL683813.2-201ENST00000605245 502 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AC097467.4-201ENST00000605504 141 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 MIR6889-201ENST00000613185 59 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms