Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PUDPP2-201ENST00000431423 643 ntBASIC7.18□□□□□ -1.26
TPM4P67936 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 AC009963.4-201ENST00000448535 339 ntBASIC7.18□□□□□ -1.26
TPM4P67936 RN7SL91P-201ENST00000469313 291 ntBASIC7.18□□□□□ -1.26
TPM4P67936 AL355032.1-201ENST00000472981 438 ntBASIC7.18□□□□□ -1.26
TPM4P67936 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM4P67936 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM4P67936 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM4P67936 AC093815.1-201ENST00000508637 280 ntBASIC7.18□□□□□ -1.26
TPM4P67936 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM4P67936 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM4P67936 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM4P67936 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM4P67936 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM4P67936 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
TPM4P67936 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.18□□□□□ -1.26
TPM4P67936 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM4P67936 MIR4428-201ENST00000584884 73 ntBASIC7.18□□□□□ -1.26
TPM4P67936 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TPM4P67936 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM4P67936 PCA3_2.1-201ENST00000612507 409 ntBASIC7.18□□□□□ -1.26
TPM4P67936 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.18□□□□□ -1.26
TPM4P67936 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TPM4P67936 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TPM4P67936 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TPM4P67936 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM4P67936 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TPM4P67936 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TPM4P67936 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 AL138847.1-201ENST00000258651 546 ntBASIC7.17□□□□□ -1.26
TPM4P67936 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 RPLP1P10-201ENST00000413972 339 ntBASIC7.17□□□□□ -1.26
TPM4P67936 FDPSP6-201ENST00000425091 512 ntBASIC7.17□□□□□ -1.26
TPM4P67936 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 BX679664.2-201ENST00000439282 283 ntBASIC7.17□□□□□ -1.26
TPM4P67936 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.17□□□□□ -1.26
TPM4P67936 AC005517.1-201ENST00000452091 489 ntBASIC7.17□□□□□ -1.26
TPM4P67936 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.17□□□□□ -1.26
TPM4P67936 AC236972.4-201ENST00000458091 963 ntBASIC7.17□□□□□ -1.26
TPM4P67936 SLC25A51P1-201ENST00000468432 871 ntBASIC7.17□□□□□ -1.26
TPM4P67936 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.17□□□□□ -1.26
TPM4P67936 AP005902.2-201ENST00000518393 307 ntBASIC7.17□□□□□ -1.26
TPM4P67936 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.17□□□□□ -1.26
TPM4P67936 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.17□□□□□ -1.26
TPM4P67936 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.17□□□□□ -1.26
TPM4P67936 AP006437.1-202ENST00000530327 933 ntBASIC7.17□□□□□ -1.26
TPM4P67936 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.17□□□□□ -1.26
TPM4P67936 MIR378C-201ENST00000578683 81 ntBASIC7.17□□□□□ -1.26
TPM4P67936 AC012510.1-201ENST00000607946 759 ntBASIC7.17□□□□□ -1.26
TPM4P67936 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.17□□□□□ -1.26
TPM4P67936 AC005753.1-201ENST00000623837 618 ntBASIC7.17□□□□□ -1.26
TPM4P67936 AC116667.2-201ENST00000641075 823 ntBASIC7.17□□□□□ -1.26
TPM4P67936 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
TPM4P67936 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 AC027575.3-201ENST00000583058 2747 ntBASIC7.17□□□□□ -1.26
TPM4P67936 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
TPM4P67936 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TPM4P67936 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.17□□□□□ -1.26
TPM4P67936 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM4P67936 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TPM4P67936 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM4P67936 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM4P67936 USP9YP3-201ENST00000434481 1766 ntBASIC7.16□□□□□ -1.26
TPM4P67936 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM4P67936 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TPM4P67936 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM4P67936 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TPM4P67936 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TPM4P67936 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TPM4P67936 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TPM4P67936 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TPM4P67936 RNA5SP321-201ENST00000362722 111 ntBASIC7.16□□□□□ -1.26
TPM4P67936 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.16□□□□□ -1.26
TPM4P67936 NHP2P2-201ENST00000396362 460 ntBASIC7.16□□□□□ -1.26
TPM4P67936 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM4P67936 RPS21P1-201ENST00000434479 247 ntBASIC7.16□□□□□ -1.26
TPM4P67936 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
TPM4P67936 RPL14P5-201ENST00000436474 730 ntBASIC7.16□□□□□ -1.26
TPM4P67936 AL390879.1-201ENST00000439143 386 ntBASIC7.16□□□□□ -1.26
TPM4P67936 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.16□□□□□ -1.26
TPM4P67936 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.16□□□□□ -1.26
TPM4P67936 RPL7AP71-201ENST00000451120 739 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms