Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC4P56524 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC4P56524 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
HDAC4P56524 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
HDAC4P56524 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
HDAC4P56524 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HDAC4P56524 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC4P56524 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC4P56524 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC4P56524 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HDAC4P56524 AL353133.1-201ENST00000407695 401 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 RN7SKP188-201ENST00000410789 317 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 SPATA20P1-201ENST00000423089 438 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC4P56524 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 HMGN1P32-201ENST00000441744 256 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 SNRPBP1-201ENST00000443634 282 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC4P56524 RN7SL350P-201ENST00000492591 299 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HDAC4P56524 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC4P56524 LDHAP1-201ENST00000509421 992 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 MRPS5P3-201ENST00000515577 166 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 IGHV3-57-201ENST00000520143 280 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC4P56524 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC4P56524 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC4P56524 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC4P56524 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC4P56524 AP003115.1-201ENST00000569849 463 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC4P56524 AC245052.7-201ENST00000601161 359 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 AL953862.2-201ENST00000603089 820 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 AL157899.1-201ENST00000604110 936 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 AC090953.1-201ENST00000604305 1092 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 AC073862.4-201ENST00000622982 854 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HDAC4P56524 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 AC073365.1-203ENST00000641055 1992 ntBASIC6.93□□□□□ -1.3
HDAC4P56524 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC4P56524 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC4P56524 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.92□□□□□ -1.3
HDAC4P56524 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HDAC4P56524 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HDAC4P56524 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.92□□□□□ -1.3
HDAC4P56524 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 FDPSP5-201ENST00000399474 1057 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 RPL12P23-201ENST00000405880 490 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 AL049697.3-201ENST00000406493 982 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC4P56524 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 AL157385.1-201ENST00000446973 268 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
HDAC4P56524 AC022730.1-201ENST00000473114 568 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 RN7SL70P-201ENST00000478322 302 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 FTH1P8-201ENST00000498161 514 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms