Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6-618P-201ENST00000363518 112 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 RN7SKP36-201ENST00000363997 312 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 RNA5SP238-201ENST00000365464 120 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NR1H2P55055 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NR1H2P55055 RPL9P21-201ENST00000392269 505 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 NPM1P31-201ENST00000399021 764 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 SNORA11D-201ENST00000408548 128 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 SNORA11E-201ENST00000408778 128 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AL512504.1-201ENST00000415494 778 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 AL359633.1-201ENST00000421403 310 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NR1H2P55055 RAB28P3-201ENST00000448325 597 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AC117394.1-201ENST00000477323 567 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.45□□□□□ -1.38
NR1H2P55055 RN7SL152P-201ENST00000484176 298 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 OR9N1P-201ENST00000491296 333 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 TECRP2-201ENST00000503270 928 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.45□□□□□ -1.38
NR1H2P55055 RFPL4AP3-201ENST00000515267 345 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 MRPS5P3-201ENST00000515577 166 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AC122713.1-201ENST00000518368 1015 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 SEC11B-201ENST00000518383 499 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NR1H2P55055 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.45□□□□□ -1.38
NR1H2P55055 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC012510.1-201ENST00000607946 759 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 AC063962.1-201ENST00000608199 521 ntBASIC6.45□□□□□ -1.38
NR1H2P55055 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
NR1H2P55055 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.45□□□□□ -1.38
NR1H2P55055 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NR1H2P55055 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
NR1H2P55055 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NR1H2P55055 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
NR1H2P55055 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NR1H2P55055 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NR1H2P55055 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.44□□□□□ -1.38
NR1H2P55055 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NR1H2P55055 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NR1H2P55055 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NR1H2P55055 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.44□□□□□ -1.38
NR1H2P55055 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.44□□□□□ -1.38
NR1H2P55055 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NR1H2P55055 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.44□□□□□ -1.38
NR1H2P55055 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NR1H2P55055 SNORA3.1-201ENST00000408166 111 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AC024937.2-201ENST00000411669 1242 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.44□□□□□ -1.38
NR1H2P55055 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.44□□□□□ -1.38
NR1H2P55055 CYP4F34P-201ENST00000425951 481 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AC073900.1-201ENST00000429766 776 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.44□□□□□ -1.38
NR1H2P55055 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.44□□□□□ -1.38
NR1H2P55055 AC019080.2-201ENST00000453859 394 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AC015820.1-201ENST00000473882 321 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 OR52A4P-202ENST00000481634 799 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AC025271.1-201ENST00000485045 429 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AL079303.1-201ENST00000486611 463 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AC117395.1-201ENST00000487390 403 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 RPL21P42-201ENST00000488408 464 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.44□□□□□ -1.38
NR1H2P55055 EEF1B2P2-201ENST00000519625 676 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 OR6M3P-201ENST00000531567 700 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.44□□□□□ -1.38
NR1H2P55055 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.44□□□□□ -1.38
NR1H2P55055 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.44□□□□□ -1.38
NR1H2P55055 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.44□□□□□ -1.38
NR1H2P55055 SNRPGP1-201ENST00000553864 222 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.44□□□□□ -1.38
NR1H2P55055 AL121839.1-201ENST00000556233 1185 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 AL109628.1-201ENST00000556877 366 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.44□□□□□ -1.38
NR1H2P55055 FCGR1CP-201ENST00000579737 1127 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 MIR378H-201ENST00000579966 83 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 OR7E19P-202ENST00000589942 844 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 KATNBL1P1-201ENST00000605192 748 ntBASIC6.44□□□□□ -1.38
NR1H2P55055 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.44□□□□□ -1.38
NR1H2P55055 MIR6813-201ENST00000621638 56 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms