Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNA5SP474-201ENST00000391234 90 ntBASIC7.03□□□□□ -1.28
SSR1P43307 RNU1-56P-201ENST00000391303 164 ntBASIC7.03□□□□□ -1.28
SSR1P43307 AC024937.2-201ENST00000411669 1242 ntBASIC7.03□□□□□ -1.28
SSR1P43307 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SSR1P43307 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 AL929410.2-201ENST00000451170 189 ntBASIC7.03□□□□□ -1.28
SSR1P43307 RN7SL149P-201ENST00000465197 281 ntBASIC7.03□□□□□ -1.28
SSR1P43307 RN7SL868P-201ENST00000485915 303 ntBASIC7.03□□□□□ -1.28
SSR1P43307 RPL10P7-201ENST00000495649 625 ntBASIC7.03□□□□□ -1.28
SSR1P43307 AC017007.1-201ENST00000511960 415 ntBASIC7.03□□□□□ -1.28
SSR1P43307 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.03□□□□□ -1.28
SSR1P43307 SNRPCP6-201ENST00000528310 210 ntBASIC7.03□□□□□ -1.28
SSR1P43307 OR4A13P-201ENST00000529316 942 ntBASIC7.03□□□□□ -1.28
SSR1P43307 AC027026.1-201ENST00000532323 742 ntBASIC7.03□□□□□ -1.28
SSR1P43307 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.03□□□□□ -1.28
SSR1P43307 AC126323.4-201ENST00000566935 234 ntBASIC7.03□□□□□ -1.28
SSR1P43307 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.03□□□□□ -1.28
SSR1P43307 WDR45BP1-201ENST00000583470 1029 ntBASIC7.03□□□□□ -1.28
SSR1P43307 AL031429.2-201ENST00000602605 649 ntBASIC7.03□□□□□ -1.28
SSR1P43307 MIR6737-201ENST00000617385 70 ntBASIC7.03□□□□□ -1.28
SSR1P43307 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 AC017037.4-201ENST00000624526 826 ntBASIC7.03□□□□□ -1.28
SSR1P43307 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.03□□□□□ -1.28
SSR1P43307 AC073869.7-201ENST00000640874 297 ntBASIC7.03□□□□□ -1.28
SSR1P43307 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SSR1P43307 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.03□□□□□ -1.28
SSR1P43307 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SSR1P43307 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.02□□□□□ -1.28
SSR1P43307 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.02□□□□□ -1.29
SSR1P43307 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SSR1P43307 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SSR1P43307 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 SNORA70.3-201ENST00000365075 132 ntBASIC7.02□□□□□ -1.29
SSR1P43307 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.02□□□□□ -1.29
SSR1P43307 MIR99A-201ENST00000384906 81 ntBASIC7.02□□□□□ -1.29
SSR1P43307 RPS7P12-201ENST00000422385 582 ntBASIC7.02□□□□□ -1.29
SSR1P43307 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.02□□□□□ -1.29
SSR1P43307 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.02□□□□□ -1.29
SSR1P43307 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.02□□□□□ -1.29
SSR1P43307 AL139156.3-201ENST00000454802 394 ntBASIC7.02□□□□□ -1.29
SSR1P43307 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
SSR1P43307 AC005017.1-201ENST00000482002 490 ntBASIC7.02□□□□□ -1.29
SSR1P43307 RPL7AP23-201ENST00000482625 776 ntBASIC7.02□□□□□ -1.29
SSR1P43307 SNORA58-201ENST00000505219 137 ntBASIC7.02□□□□□ -1.29
SSR1P43307 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.02□□□□□ -1.29
SSR1P43307 RN7SKP67-201ENST00000515905 235 ntBASIC7.02□□□□□ -1.29
SSR1P43307 AC020937.1-201ENST00000519677 1013 ntBASIC7.02□□□□□ -1.29
SSR1P43307 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.02□□□□□ -1.29
SSR1P43307 IGLV3-6-201ENST00000523937 250 ntBASIC7.02□□□□□ -1.29
SSR1P43307 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.02□□□□□ -1.29
SSR1P43307 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.02□□□□□ -1.29
SSR1P43307 AC116158.1-201ENST00000560231 2129 ntBASIC7.02□□□□□ -1.29
SSR1P43307 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.02□□□□□ -1.29
SSR1P43307 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.02□□□□□ -1.29
SSR1P43307 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.02□□□□□ -1.29
SSR1P43307 RN7SL131P-201ENST00000579043 256 ntBASIC7.02□□□□□ -1.29
SSR1P43307 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.02□□□□□ -1.29
SSR1P43307 AC010487.1-201ENST00000594408 1172 ntBASIC7.02□□□□□ -1.29
SSR1P43307 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.02□□□□□ -1.29
SSR1P43307 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.02□□□□□ -1.29
SSR1P43307 AC018659.2-201ENST00000624690 715 ntBASIC7.02□□□□□ -1.29
SSR1P43307 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 AL391261.1-201ENST00000555712 1479 ntBASIC7.02□□□□□ -1.29
SSR1P43307 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.02□□□□□ -1.29
SSR1P43307 CDY5P-201ENST00000411487 1580 ntBASIC7.02□□□□□ -1.29
SSR1P43307 CDY9P-201ENST00000451397 1580 ntBASIC7.02□□□□□ -1.29
SSR1P43307 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
SSR1P43307 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 DNM1P47-203ENST00000571780 12667 ntBASIC7.02□□□□□ -1.29
SSR1P43307 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.02□□□□□ -1.29
SSR1P43307 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
SSR1P43307 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.02□□□□□ -1.29
SSR1P43307 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSR1P43307 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.01□□□□□ -1.29
SSR1P43307 AC022034.1-201ENST00000512867 2156 ntBASIC7.01□□□□□ -1.29
SSR1P43307 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms