Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SL775P-201ENST00000498361 336 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC010627.1-201ENST00000503819 1294 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC092349.1-201ENST00000504903 310 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 GAPDHP71-201ENST00000511530 1003 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 NPM1P21-201ENST00000513394 762 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC8.4□□□□□ -1.06
ERCC3P19447 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC090888.2-201ENST00000559765 1144 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 NIFKP6-201ENST00000598115 845 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC073387.2-201ENST00000604797 784 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 RNU4-5P-201ENST00000607255 135 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC079395.3-201ENST00000615161 484 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 MIR8089-201ENST00000620165 82 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC004232.3-201ENST00000622977 525 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC022743.1-201ENST00000624990 664 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC136428.4-201ENST00000634254 1155 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC135068.11-201ENST00000636378 921 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
ERCC3P19447 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.07
ERCC3P19447 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
ERCC3P19447 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.4□□□□□ -1.07
ERCC3P19447 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
ERCC3P19447 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
ERCC3P19447 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.4□□□□□ -1.07
ERCC3P19447 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
ERCC3P19447 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.07
ERCC3P19447 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
ERCC3P19447 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.4□□□□□ -1.07
ERCC3P19447 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 SALL4P7-201ENST00000555779 3120 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.39□□□□□ -1.07
ERCC3P19447 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.39□□□□□ -1.07
ERCC3P19447 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.39□□□□□ -1.07
ERCC3P19447 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
ERCC3P19447 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 XKRYP1-201ENST00000423438 492 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC8.39□□□□□ -1.07
ERCC3P19447 XKRYP2-201ENST00000432915 492 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 MED28P7-201ENST00000456611 530 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 RPL34P34-201ENST00000465389 354 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 RPSAP48-201ENST00000466509 889 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 RPS4XP17-201ENST00000479057 754 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC108103.1-201ENST00000511286 446 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 VBP1-203ENST00000535916 944 ntTSL 2 BASIC8.39□□□□□ -1.07
ERCC3P19447 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC105275.2-201ENST00000567907 711 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 MIR5682-201ENST00000584864 76 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 SNX29P2-204ENST00000603801 875 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 NDUFB9P1-201ENST00000604683 510 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC093673.2-201ENST00000609674 331 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 HSPD1P7-201ENST00000447985 1686 ntBASIC8.39□□□□□ -1.07
ERCC3P19447 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
ERCC3P19447 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ERCC3P19447 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms