Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
HMGA1P17096 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGA1P17096 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
HMGA1P17096 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HMGA1P17096 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HMGA1P17096 RNA5SP188-201ENST00000362916 129 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HMGA1P17096 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
HMGA1P17096 RN7SKP121-201ENST00000410842 305 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 KCTD9P1-201ENST00000430462 1167 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGA1P17096 DNAJA1P5-201ENST00000440278 943 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 AC097463.1-201ENST00000447288 481 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGA1P17096 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGA1P17096 RBBP4P1-201ENST00000502424 1276 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.63□□□□□ -1.35
HMGA1P17096 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGA1P17096 IGKV1D-22-201ENST00000518953 324 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 AC084337.1-201ENST00000524809 686 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.63□□□□□ -1.35
HMGA1P17096 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGA1P17096 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HMGA1P17096 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGA1P17096 HSPD1P4-201ENST00000547203 1702 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGA1P17096 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 AL121579.2-201ENST00000555466 590 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 AC090826.1-203ENST00000569235 490 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 AC027575.3-201ENST00000583058 2747 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGA1P17096 AL008723.3-201ENST00000608926 449 ntBASIC6.63□□□□□ -1.35
HMGA1P17096 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGA1P17096 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HMGA1P17096 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HMGA1P17096 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HMGA1P17096 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGA1P17096 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
HMGA1P17096 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGA1P17096 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 MAPK10-344ENST00000641718 3746 ntBASIC6.62□□□□□ -1.35
HMGA1P17096 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGA1P17096 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HMGA1P17096 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGA1P17096 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 COX6B1P3-201ENST00000312310 260 ntBASIC6.62□□□□□ -1.35
HMGA1P17096 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 SNORA51.9-201ENST00000384295 124 ntBASIC6.62□□□□□ -1.35
HMGA1P17096 MIR640-201ENST00000385086 96 ntBASIC6.62□□□□□ -1.35
HMGA1P17096 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGA1P17096 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 RPL34P33-201ENST00000486062 334 ntBASIC6.62□□□□□ -1.35
HMGA1P17096 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGA1P17096 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.62□□□□□ -1.35
HMGA1P17096 AC013731.1-201ENST00000604340 883 ntBASIC6.62□□□□□ -1.35
HMGA1P17096 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.62□□□□□ -1.35
HMGA1P17096 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGA1P17096 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HMGA1P17096 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGA1P17096 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms