Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 RN7SKP187-201ENST00000365536 330 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 RN7SKP188-201ENST00000410789 317 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 MARK2P8-201ENST00000476069 952 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 GUSBP9-201ENST00000510138 584 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AL390198.2-201ENST00000510553 222 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC093816.1-201ENST00000515076 913 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 OR4A41P-201ENST00000533053 928 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 MT1CP-201ENST00000567054 174 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 RN7SL270P-201ENST00000579643 281 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC091133.5-201ENST00000603088 301 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 WBP1LP12-201ENST00000604449 331 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC004241.2-201ENST00000614562 444 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 ASNSP6-201ENST00000592770 1618 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC007114.2-201ENST00000576014 4281 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 Z97989.1-201ENST00000531702 2421 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AL136531.3-201ENST00000624378 3658 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 RNU1-55P-201ENST00000365510 158 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 RANP6-201ENST00000413691 644 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 GPN3P1-201ENST00000423883 535 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AL139158.1-201ENST00000424719 340 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 TIMM8BP2-201ENST00000445940 251 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 RPL26P30-201ENST00000453533 435 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 SEPT14P1-201ENST00000458703 648 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC093664.1-201ENST00000511779 289 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AL445383.1-201ENST00000554689 874 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC060766.1-201ENST00000590824 627 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC011891.2-201ENST00000604949 397 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 MIR7109-201ENST00000613748 65 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC012676.3-201ENST00000614983 479 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 uc_338.29-201ENST00000615099 168 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 MIR7854-201ENST00000620068 65 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC132825.8-201ENST00000640783 297 ntBASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms