Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 TAS2R5-201ENST00000247883 1151 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 Y_RNA.256-201ENST00000364594 104 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 RNU6-259P-201ENST00000383999 107 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 Y_RNA.509-201ENST00000384506 99 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AL138807.1-201ENST00000400354 459 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 Z99497.1-201ENST00000421282 135 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AL139413.1-201ENST00000421309 217 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 SLC25A24P1-202ENST00000434803 1220 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 ACTBP12-201ENST00000435871 418 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AL096803.1-201ENST00000456921 1021 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 RN7SL854P-201ENST00000459767 295 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC116337.2-201ENST00000477662 156 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC109486.1-201ENST00000486833 374 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 ENPP7P10-201ENST00000504828 933 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 STMN1P2-201ENST00000508435 439 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 MAST4-IT1-201ENST00000514241 658 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 SEPT10P1-201ENST00000517342 1162 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 RPL10P19-201ENST00000519013 301 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 IGLVI-68-201ENST00000519525 345 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 DEFB108A-201ENST00000530110 222 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC091489.2-201ENST00000566263 604 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC012414.6-201ENST00000568241 401 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 MED31-202ENST00000574128 619 ntTSL 3 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 MIR4789-201ENST00000577469 82 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC015818.5-201ENST00000578659 356 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 EIF1P6-201ENST00000600054 334 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC006539.2-201ENST00000601729 572 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC103792.1-201ENST00000603591 919 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AL022154.1-201ENST00000604698 785 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC131902.3-201ENST00000611767 581 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC010542.5-201ENST00000612427 382 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC015660.5-201ENST00000623238 564 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 OR5H6-203ENST00000642105 978 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 BCL9P1-201ENST00000506012 2561 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 AC112255.1-201ENST00000624070 2493 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 AC078880.4-201ENST00000617627 1749 ntBASIC8□□□□□ -1.13
CUEDC1Q9NWM3 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 OR2A3P-202ENST00000641249 1776 ntBASIC8□□□□□ -1.13
CUEDC1Q9NWM3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 AC131649.2-201ENST00000624925 4439 ntBASIC8□□□□□ -1.13
CUEDC1Q9NWM3 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC8□□□□□ -1.13
CUEDC1Q9NWM3 THAP12P6-201ENST00000431978 2310 ntBASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms