Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AC116165.3-201ENST00000614524 400 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 MRPL57P1-201ENST00000621486 265 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AC005514.1-201ENST00000623521 208 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 OR5M2P-202ENST00000641241 4242 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC110373.1-201ENST00000505994 3505 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC006213.6-201ENST00000623722 4179 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 WBP11P1-201ENST00000562560 1931 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 RN7SKP118-201ENST00000364331 330 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 U3.52-201ENST00000384034 216 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 UBBP5-201ENST00000446970 266 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 EIF3LP2-201ENST00000457262 807 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 RN7SKP198-201ENST00000459286 306 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 RN7SL350P-201ENST00000492591 299 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC233699.1-201ENST00000569955 1168 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC115989.2-201ENST00000578640 563 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AL078623.1-201ENST00000602702 907 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC100814.1-201ENST00000606963 623 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC093635.1-201ENST00000609028 555 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC010329.1-201ENST00000593903 8328 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 AC007114.2-201ENST00000576014 4281 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 TMEM75-201ENST00000624314 2165 ntBASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZNF549Q6P9A3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
ZNF549Q6P9A3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
ZNF549Q6P9A3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
ZNF549Q6P9A3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
ZNF549Q6P9A3 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
ZNF549Q6P9A3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
ZNF549Q6P9A3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
ZNF549Q6P9A3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 USP9YP19-201ENST00000412165 485 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 AC117434.1-201ENST00000419971 836 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 CDC42P6-201ENST00000421246 576 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 RPL23AP85-201ENST00000421838 433 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 AL596268.1-201ENST00000427910 1048 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 CCNJP1-201ENST00000450600 1149 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 SUMO2P10-201ENST00000452006 288 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 AC022080.2-201ENST00000452932 533 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 RNA5SP96-201ENST00000516041 107 ntBASIC6.46□□□□□ -1.38
ZNF549Q6P9A3 RNU6-551P-201ENST00000516661 103 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms