Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC078880.4-201ENST00000617627 1749 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 MIR7-1-201ENST00000384871 110 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 EEF1GP6-201ENST00000402309 905 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AL451061.1-201ENST00000407887 862 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC010086.1-201ENST00000437359 1052 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 RN7SL382P-201ENST00000482631 282 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 RN7SL187P-201ENST00000495587 303 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC133552.4-201ENST00000576103 676 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 RN7SL426P-201ENST00000579106 295 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 MIR3908-201ENST00000579798 126 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC090774.2-201ENST00000584708 322 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 RPS27AP19-201ENST00000597285 458 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AL023583.1-201ENST00000607518 1143 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC091768.1-201ENST00000609258 930 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC008833.1-201ENST00000611633 691 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC104307.1-201ENST00000616142 196 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC131009.3-201ENST00000621809 287 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC117503.3-201ENST00000623811 601 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC017037.4-201ENST00000624526 826 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 HPVC1-201ENST00000629899 1198 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC006453.3-201ENST00000635891 377 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 TMCC1P1-201ENST00000518897 1980 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC073365.1-203ENST00000641055 1992 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CX3CL1P78423 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 AC119674.1-204ENST00000641348 1343 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 AP000547.3-204ENST00000588548 2523 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AL591848.4-201ENST00000567832 3472 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.42□□□□□ -1.54
CX3CL1P78423 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 RNA5SP65-201ENST00000363166 119 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 RN7SKP189-201ENST00000365042 330 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 AL451142.1-201ENST00000375867 775 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 MIR187-201ENST00000385062 109 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 MIR27A-201ENST00000385073 78 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 CYCSP17-201ENST00000407870 315 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AL139100.1-201ENST00000408001 498 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 GABARAPL3-201ENST00000412799 354 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AC091492.1-201ENST00000419844 272 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AL645936.2-201ENST00000430565 928 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms