Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 TVP23BP2-201ENST00000455082 615 ntBASIC5.93□□□□□ -1.46
SOX2P48431 ATP5G1P3-201ENST00000463301 410 ntBASIC5.93□□□□□ -1.46
SOX2P48431 RPL5P12-201ENST00000477071 851 ntBASIC5.93□□□□□ -1.46
SOX2P48431 MYL6P4-201ENST00000477911 453 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC079944.1-201ENST00000485426 495 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC074386.1-206ENST00000487102 761 ntBASIC5.93□□□□□ -1.46
SOX2P48431 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 RN7SL187P-201ENST00000495587 303 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC118282.1-201ENST00000506408 765 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 RNA5SP518-201ENST00000515957 119 ntBASIC5.93□□□□□ -1.46
SOX2P48431 NPM1P52-201ENST00000518264 846 ntBASIC5.93□□□□□ -1.46
SOX2P48431 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 AC113192.3-201ENST00000529152 742 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 AC027216.1-201ENST00000577726 685 ntBASIC5.93□□□□□ -1.46
SOX2P48431 OR1AB1P-201ENST00000585564 761 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC015911.5-201ENST00000587076 451 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SOX2P48431 AC006116.6-201ENST00000593258 1103 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC020914.7-201ENST00000594477 545 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC011497.2-201ENST00000600255 639 ntBASIC5.93□□□□□ -1.46
SOX2P48431 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX2P48431 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX2P48431 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX2P48431 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SOX2P48431 AP003789.1-201ENST00000617737 605 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC009269.6-201ENST00000621778 588 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC090506.2-201ENST00000624521 419 ntBASIC5.93□□□□□ -1.46
SOX2P48431 AC063952.1-203ENST00000634410 658 ntBASIC5.93□□□□□ -1.46
SOX2P48431 JAML-213ENST00000640745 951 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX2P48431 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SOX2P48431 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX2P48431 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SOX2P48431 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX2P48431 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 AC010401.2-201ENST00000575137 4934 ntBASIC5.92□□□□□ -1.46
SOX2P48431 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 RACGAP1P-201ENST00000550663 1879 ntBASIC5.92□□□□□ -1.46
SOX2P48431 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 AC007012.2-201ENST00000623206 1676 ntBASIC5.92□□□□□ -1.46
SOX2P48431 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SOX2P48431 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SOX2P48431 SNORA63.3-201ENST00000362682 132 ntBASIC5.92□□□□□ -1.46
SOX2P48431 RN7SKP55-201ENST00000364888 307 ntBASIC5.92□□□□□ -1.46
SOX2P48431 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SOX2P48431 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 AC096644.3-201ENST00000416788 338 ntBASIC5.92□□□□□ -1.46
SOX2P48431 AC018804.1-201ENST00000430381 618 ntBASIC5.92□□□□□ -1.46
SOX2P48431 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 SUMO2P8-201ENST00000434672 286 ntBASIC5.92□□□□□ -1.46
SOX2P48431 ST13P2-201ENST00000438916 1109 ntBASIC5.92□□□□□ -1.46
SOX2P48431 DBIL5P2-201ENST00000443827 253 ntBASIC5.92□□□□□ -1.46
SOX2P48431 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX2P48431 AL139156.3-201ENST00000454802 394 ntBASIC5.92□□□□□ -1.46
SOX2P48431 AC108751.3-201ENST00000461814 1020 ntBASIC5.92□□□□□ -1.46
SOX2P48431 RN7SL263P-201ENST00000467969 290 ntBASIC5.92□□□□□ -1.46
SOX2P48431 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 RN7SL182P-201ENST00000496499 300 ntBASIC5.92□□□□□ -1.46
SOX2P48431 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 OR5M6P-201ENST00000530227 937 ntBASIC5.92□□□□□ -1.46
SOX2P48431 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 AC005000.1-201ENST00000536192 288 ntBASIC5.92□□□□□ -1.46
SOX2P48431 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SOX2P48431 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 AL158211.1-201ENST00000566763 763 ntBASIC5.92□□□□□ -1.46
SOX2P48431 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.92□□□□□ -1.46
SOX2P48431 SNRPCP20-201ENST00000588011 210 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms