Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 AC068408.1-201ENST00000577406 1144 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.86□□□□□ -1.31
PTPN9P43378 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 MIPEPP2-201ENST00000422560 1819 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.85□□□□□ -1.31
PTPN9P43378 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.85□□□□□ -1.31
PTPN9P43378 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 RNA5SP308-201ENST00000362532 115 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.85□□□□□ -1.31
PTPN9P43378 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PTPN9P43378 RN7SKP205-201ENST00000410999 307 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.85□□□□□ -1.31
PTPN9P43378 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.85□□□□□ -1.31
PTPN9P43378 AL589794.1-201ENST00000424971 390 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.85□□□□□ -1.31
PTPN9P43378 RPL31P11-202ENST00000454082 372 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.85□□□□□ -1.31
PTPN9P43378 RN7SL83P-201ENST00000468131 297 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.85□□□□□ -1.31
PTPN9P43378 CASP1P2-201ENST00000526830 1258 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.85□□□□□ -1.31
PTPN9P43378 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.85□□□□□ -1.31
PTPN9P43378 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.85□□□□□ -1.31
PTPN9P43378 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PTPN9P43378 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 CYCSP1-201ENST00000604815 315 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 AC007671.1-201ENST00000616957 830 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 AP001264.1-201ENST00000620602 703 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 CFTRP2-201ENST00000634304 199 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 AL731556.1-201ENST00000394628 3711 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.85□□□□□ -1.31
PTPN9P43378 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.85□□□□□ -1.31
PTPN9P43378 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PTPN9P43378 CCAT2-201ENST00000630920 1752 ntBASIC6.85□□□□□ -1.31
PTPN9P43378 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 AC078880.4-201ENST00000617627 1749 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 AL161901.1-201ENST00000624954 3425 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 AL359694.2-201ENST00000567753 1615 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
PTPN9P43378 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
PTPN9P43378 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 U3.52-201ENST00000384034 216 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AL050335.1-201ENST00000396909 869 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.84□□□□□ -1.31
PTPN9P43378 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.84□□□□□ -1.31
PTPN9P43378 AC234771.4-201ENST00000441416 730 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PTPN9P43378 RPL5P14-201ENST00000494197 878 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.84□□□□□ -1.31
PTPN9P43378 AC131392.1-201ENST00000506490 633 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.84□□□□□ -1.31
PTPN9P43378 RNU6-362P-201ENST00000516736 90 ntBASIC6.84□□□□□ -1.31
PTPN9P43378 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms