Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.05□□□□□ -1.28
COL6A2P12110 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL6A2P12110 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.05□□□□□ -1.28
COL6A2P12110 AC245036.5-201ENST00000596330 847 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 PRR13P5-201ENST00000596581 442 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AC008536.1-201ENST00000602872 669 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AL023806.2-201ENST00000603042 263 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AC002487.1-201ENST00000604565 994 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AC111186.1-201ENST00000604684 130 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.05□□□□□ -1.28
COL6A2P12110 OR51C1P-201ENST00000608504 942 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AC021851.1-201ENST00000608537 1082 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AC243830.3-201ENST00000616810 376 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AC078880.5-201ENST00000617845 421 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AP003485.2-201ENST00000623636 610 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
COL6A2P12110 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.05□□□□□ -1.28
COL6A2P12110 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.05□□□□□ -1.28
COL6A2P12110 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
COL6A2P12110 DDX43P1-201ENST00000510713 1763 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 CUL4AP1-201ENST00000514750 1863 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 AL132656.3-201ENST00000606384 1595 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL6A2P12110 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 RNU6-354P-201ENST00000383862 107 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 SNORA70.8-201ENST00000384231 136 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 RNU6-610P-201ENST00000384264 107 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 SNORD116-2-201ENST00000384274 95 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 SNORD116-6-201ENST00000384711 96 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 HNRNPCP2-201ENST00000399515 881 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AP002530.1-201ENST00000405705 684 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 LUZP4P1-201ENST00000415420 344 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 GNAI2P2-201ENST00000417003 916 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 OR7E117P-201ENST00000422682 1112 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC245047.2-201ENST00000441060 530 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC7.04□□□□□ -1.28
COL6A2P12110 RPSAP7-201ENST00000456871 885 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AC115223.1-201ENST00000466377 870 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 HMGB1P38-201ENST00000490557 577 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC7.04□□□□□ -1.28
COL6A2P12110 MTCO1P31-201ENST00000506355 492 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC108103.1-201ENST00000511286 446 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AC111000.1-201ENST00000514545 713 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 ADI1P2-201ENST00000514945 429 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 RNU6-311P-201ENST00000516224 102 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 HMGB1P46-201ENST00000520062 610 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 OR4A17P-201ENST00000526032 904 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.04□□□□□ -1.28
COL6A2P12110 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.04□□□□□ -1.28
COL6A2P12110 OR4U1P-201ENST00000554958 912 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.04□□□□□ -1.28
COL6A2P12110 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 DHFRP1-201ENST00000579682 559 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AC124283.4-201ENST00000581815 456 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.04□□□□□ -1.28
COL6A2P12110 OR7A19P-201ENST00000608051 733 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms