Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 CASC19-212ENST00000641153 1287 ntBASIC7.15□□□□□ -1.26
UBE3AQ05086 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
UBE3AQ05086 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
UBE3AQ05086 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
UBE3AQ05086 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.15□□□□□ -1.26
UBE3AQ05086 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.26
UBE3AQ05086 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
UBE3AQ05086 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
UBE3AQ05086 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.15□□□□□ -1.27
UBE3AQ05086 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
UBE3AQ05086 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
UBE3AQ05086 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
UBE3AQ05086 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
UBE3AQ05086 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.15□□□□□ -1.27
UBE3AQ05086 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
UBE3AQ05086 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 AC107980.1-201ENST00000558671 3355 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
UBE3AQ05086 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 SNORA38B-201ENST00000363524 131 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 SNORA70.3-201ENST00000365075 132 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 RNU1-84P-201ENST00000365447 164 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.14□□□□□ -1.27
UBE3AQ05086 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 AL929472.1-201ENST00000417484 429 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 TRGV7-201ENST00000427089 353 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 RN7SL221P-201ENST00000466190 281 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 AP001960.1-201ENST00000506494 658 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 SNORD116-30-201ENST00000516468 85 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 TRIM51DP-201ENST00000529746 596 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.14□□□□□ -1.27
UBE3AQ05086 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.14□□□□□ -1.27
UBE3AQ05086 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.14□□□□□ -1.27
UBE3AQ05086 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.14□□□□□ -1.27
UBE3AQ05086 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.14□□□□□ -1.27
UBE3AQ05086 AC020658.4-201ENST00000613987 684 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.14□□□□□ -1.27
UBE3AQ05086 AC243960.7-201ENST00000623532 707 ntBASIC7.14□□□□□ -1.27
UBE3AQ05086 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
UBE3AQ05086 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UBE3AQ05086 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.14□□□□□ -1.27
UBE3AQ05086 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UBE3AQ05086 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE3AQ05086 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE3AQ05086 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE3AQ05086 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UBE3AQ05086 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE3AQ05086 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
UBE3AQ05086 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE3AQ05086 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE3AQ05086 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.13□□□□□ -1.27
UBE3AQ05086 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE3AQ05086 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
UBE3AQ05086 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
UBE3AQ05086 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UBE3AQ05086 AC008171.1-201ENST00000395058 200 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 AL773545.3-201ENST00000414297 706 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UBE3AQ05086 BX119904.3-201ENST00000428194 957 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 AC108479.1-201ENST00000431142 427 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.13□□□□□ -1.27
UBE3AQ05086 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE3AQ05086 AC094085.1-201ENST00000468914 584 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 AC055733.3-201ENST00000505214 523 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 AC113398.2-201ENST00000507630 558 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.13□□□□□ -1.27
UBE3AQ05086 CYCSP25-201ENST00000525280 316 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.13□□□□□ -1.27
UBE3AQ05086 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE3AQ05086 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.13□□□□□ -1.27
UBE3AQ05086 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UBE3AQ05086 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE3AQ05086 AL589863.1-201ENST00000595383 631 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 SNORD96A-201ENST00000606577 79 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 PCA3_2.1-201ENST00000612507 409 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 AC107905.1-201ENST00000616204 426 ntBASIC7.13□□□□□ -1.27
UBE3AQ05086 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms