Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNA5SP115-201ENST00000411160 107 ntBASIC5.82□□□□□ -1.48
SRP9P49458 SETP22-201ENST00000412243 957 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AL663061.1-201ENST00000416625 580 ntBASIC5.82□□□□□ -1.48
SRP9P49458 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 RPL3P11-201ENST00000434028 1146 ntBASIC5.82□□□□□ -1.48
SRP9P49458 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SRP9P49458 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.82□□□□□ -1.48
SRP9P49458 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.82□□□□□ -1.48
SRP9P49458 AC009244.1-201ENST00000450566 258 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AL354872.1-201ENST00000456361 967 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SRP9P49458 SNX18P23-201ENST00000510867 677 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.82□□□□□ -1.48
SRP9P49458 AC026774.2-201ENST00000513990 1098 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AC096661.1-201ENST00000515870 822 ntBASIC5.82□□□□□ -1.48
SRP9P49458 IGKV2D-38-201ENST00000518423 240 ntBASIC5.82□□□□□ -1.48
SRP9P49458 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.82□□□□□ -1.48
SRP9P49458 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.82□□□□□ -1.48
SRP9P49458 OR4A6P-201ENST00000534364 970 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AC089984.3-201ENST00000552838 363 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.82□□□□□ -1.48
SRP9P49458 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.82□□□□□ -1.48
SRP9P49458 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SRP9P49458 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.82□□□□□ -1.48
SRP9P49458 AC010287.1-201ENST00000566916 357 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AC004232.1-201ENST00000571388 208 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 MIR378H-201ENST00000579966 83 ntBASIC5.82□□□□□ -1.48
SRP9P49458 DIMT1P1-201ENST00000603970 763 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.82□□□□□ -1.48
SRP9P49458 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.82□□□□□ -1.48
SRP9P49458 AL137246.2-201ENST00000613439 662 ntBASIC5.82□□□□□ -1.48
SRP9P49458 MIR6883-201ENST00000614952 78 ntBASIC5.82□□□□□ -1.48
SRP9P49458 TCL6_3.1-201ENST00000619064 137 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AC021422.1-201ENST00000621212 473 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AC012653.2-201ENST00000621880 420 ntBASIC5.82□□□□□ -1.48
SRP9P49458 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.82□□□□□ -1.48
SRP9P49458 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.82□□□□□ -1.48
SRP9P49458 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SRP9P49458 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SRP9P49458 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SRP9P49458 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SRP9P49458 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SRP9P49458 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.82□□□□□ -1.48
SRP9P49458 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SRP9P49458 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SRP9P49458 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SRP9P49458 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SRP9P49458 TRIM53CP-201ENST00000531490 1354 ntBASIC5.81□□□□□ -1.48
SRP9P49458 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 AC020658.2-201ENST00000559030 4020 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AL512329.1-201ENST00000404600 1592 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AP000432.2-201ENST00000624164 2048 ntBASIC5.81□□□□□ -1.48
SRP9P49458 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SRP9P49458 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 AL451046.1-201ENST00000406097 534 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.81□□□□□ -1.48
SRP9P49458 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.81□□□□□ -1.48
SRP9P49458 AL672212.1-201ENST00000422246 400 ntBASIC5.81□□□□□ -1.48
SRP9P49458 SETP9-201ENST00000423837 832 ntBASIC5.81□□□□□ -1.48
SRP9P49458 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.81□□□□□ -1.48
SRP9P49458 AL139415.1-201ENST00000424862 352 ntBASIC5.81□□□□□ -1.48
SRP9P49458 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.81□□□□□ -1.48
SRP9P49458 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.81□□□□□ -1.48
SRP9P49458 CRYGGP-201ENST00000443337 145 ntBASIC5.81□□□□□ -1.48
SRP9P49458 REG1CP-206ENST00000447469 496 ntBASIC5.81□□□□□ -1.48
SRP9P49458 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.81□□□□□ -1.48
SRP9P49458 RN7SL187P-201ENST00000495587 303 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.81□□□□□ -1.48
SRP9P49458 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.81□□□□□ -1.48
SRP9P49458 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.81□□□□□ -1.48
SRP9P49458 IGLV3-6-201ENST00000523937 250 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AP001804.1-201ENST00000526868 919 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.81□□□□□ -1.48
SRP9P49458 PPIAP6-201ENST00000557078 499 ntBASIC5.81□□□□□ -1.48
SRP9P49458 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 MIR4312-201ENST00000579909 76 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.81□□□□□ -1.48
SRP9P49458 AL591222.2-201ENST00000604443 754 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.81□□□□□ -1.48
SRP9P49458 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.81□□□□□ -1.48
SRP9P49458 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 AC010333.3-201ENST00000615100 402 ntBASIC5.81□□□□□ -1.48
SRP9P49458 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.81□□□□□ -1.48
SRP9P49458 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.81□□□□□ -1.48
SRP9P49458 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SRP9P49458 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.81□□□□□ -1.48
SRP9P49458 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SRP9P49458 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms