Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 AC005332.9-201ENST00000620266 2921 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PTPN9P43378 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 AC010624.4-201ENST00000597606 1351 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PTPN9P43378 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PTPN9P43378 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PTPN9P43378 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PTPN9P43378 RNA5SP512-201ENST00000364550 120 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 RPL12P23-201ENST00000405880 490 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 AL023284.3-201ENST00000407767 334 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 AL596268.1-201ENST00000427910 1048 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 RPS19P6-201ENST00000441327 433 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN9P43378 AKR1D1P1-201ENST00000457236 936 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 AC063955.1-201ENST00000462872 685 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 RN7SL790P-201ENST00000474043 298 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 AC092824.1-201ENST00000483524 576 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN9P43378 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN9P43378 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN9P43378 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN9P43378 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN9P43378 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN9P43378 CHEK2P2-201ENST00000554701 672 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN9P43378 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN9P43378 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN9P43378 AC097467.4-201ENST00000605504 141 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 AL513218.1-201ENST00000606527 391 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 SNORD96A-201ENST00000606577 79 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN9P43378 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 AC022960.2-201ENST00000616300 666 ntBASIC6.87□□□□□ -1.31
PTPN9P43378 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN9P43378 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN9P43378 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN9P43378 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 CDY5P-201ENST00000411487 1580 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 CDY9P-201ENST00000451397 1580 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 CDY10P-201ENST00000452415 1567 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.86□□□□□ -1.31
PTPN9P43378 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 PABPC1P8-201ENST00000452851 2086 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 AC022905.1-201ENST00000503430 3048 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
PTPN9P43378 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 NEK2P2-201ENST00000438441 1338 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PTPN9P43378 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PTPN9P43378 RNA5SP333-201ENST00000363466 118 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 RNA5SP334-201ENST00000364825 118 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 MRPS6P2-201ENST00000381143 370 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 RPL5P20-201ENST00000403848 896 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 CASKP1-201ENST00000412870 582 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.86□□□□□ -1.31
PTPN9P43378 AC006509.1-201ENST00000420788 634 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 RPL23AP85-201ENST00000421838 433 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 VN1R53P-201ENST00000429536 957 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.86□□□□□ -1.31
PTPN9P43378 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.86□□□□□ -1.31
PTPN9P43378 CCNJP1-201ENST00000450600 1149 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.86□□□□□ -1.31
PTPN9P43378 NPM1P9-201ENST00000453156 844 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 AC009567.2-201ENST00000502989 349 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.86□□□□□ -1.31
PTPN9P43378 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.86□□□□□ -1.31
PTPN9P43378 SNORA48.9-201ENST00000516419 162 ntBASIC6.86□□□□□ -1.31
PTPN9P43378 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN9P43378 AC026956.1-201ENST00000558741 396 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms