Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 CROCCP3-202ENST00000420820 1947 ntBASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB1Q9Y5G3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 AC012414.1-201ENST00000556676 535 ntBASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB1Q9Y5G3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB1Q9Y5G3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB1Q9Y5G3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGB1Q9Y5G3 AC020916.1-201ENST00000587762 1774 ntBASIC18.09■□□□□ 0.49
PCDHGB1Q9Y5G3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB1Q9Y5G3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB1Q9Y5G3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGB1Q9Y5G3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB1Q9Y5G3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGB1Q9Y5G3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms