Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf220Q6PDX6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf220Q6PDX6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf220Q6PDX6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf220Q6PDX6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Gm13534-201ENSMUST00000121169 513 ntBASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms