Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cks1bP61025 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.22□□□□□ -0.45
Cks1bP61025 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cks1bP61025 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cks1bP61025 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Cks1bP61025 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cks1bP61025 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cks1bP61025 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cks1bP61025 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.22□□□□□ -0.45
Cks1bP61025 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.22□□□□□ -0.45
Cks1bP61025 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cks1bP61025 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cks1bP61025 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.22□□□□□ -0.45
Cks1bP61025 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cks1bP61025 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cks1bP61025 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Cks1bP61025 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1bP61025 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Cks1bP61025 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.21□□□□□ -0.45
Cks1bP61025 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.21□□□□□ -0.45
Cks1bP61025 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.21□□□□□ -0.45
Cks1bP61025 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1bP61025 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Cks1bP61025 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Cks1bP61025 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Cks1bP61025 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1bP61025 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1bP61025 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1bP61025 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1bP61025 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1bP61025 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1bP61025 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1bP61025 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.2□□□□□ -0.46
Cks1bP61025 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cks1bP61025 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.2□□□□□ -0.46
Cks1bP61025 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Cks1bP61025 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.2□□□□□ -0.46
Cks1bP61025 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.2□□□□□ -0.46
Cks1bP61025 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cks1bP61025 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Cks1bP61025 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.2□□□□□ -0.46
Cks1bP61025 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.2□□□□□ -0.46
Cks1bP61025 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cks1bP61025 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cks1bP61025 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Cks1bP61025 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms