Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC1P35052 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.82■□□□□ 0.6
GPC1P35052 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC1P35052 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC1P35052 KRT8P17-201ENST00000453110 1448 ntBASIC18.82■□□□□ 0.6
GPC1P35052 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC1P35052 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.82■□□□□ 0.6
GPC1P35052 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC1P35052 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GPC1P35052 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GPC1P35052 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC1P35052 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC1P35052 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
GPC1P35052 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.81■□□□□ 0.6
GPC1P35052 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.81■□□□□ 0.6
GPC1P35052 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.81■□□□□ 0.6
GPC1P35052 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.81■□□□□ 0.6
GPC1P35052 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC1P35052 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 KRT8P20-201ENST00000423953 1409 ntBASIC18.81■□□□□ 0.6
GPC1P35052 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC1P35052 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC1P35052 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC1P35052 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC1P35052 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GPC1P35052 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC1P35052 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.8■□□□□ 0.6
GPC1P35052 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC1P35052 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GPC1P35052 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 HLA-G-202ENST00000376815 851 ntBASIC18.8■□□□□ 0.6
GPC1P35052 HLA-G-203ENST00000376818 1127 ntBASIC18.8■□□□□ 0.6
GPC1P35052 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC1P35052 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC1P35052 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC1P35052 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC1P35052 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 AL031963.3-201ENST00000606441 850 ntBASIC18.8■□□□□ 0.6
GPC1P35052 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GPC1P35052 KRT16P6-202ENST00000425692 1426 ntBASIC18.8■□□□□ 0.6
GPC1P35052 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC1P35052 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GPC1P35052 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.79■□□□□ 0.6
GPC1P35052 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.79■□□□□ 0.6
GPC1P35052 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GPC1P35052 AC006970.2-201ENST00000450065 779 ntBASIC18.79■□□□□ 0.6
GPC1P35052 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.79■□□□□ 0.6
GPC1P35052 C2orf69P4-201ENST00000565394 541 ntBASIC18.79■□□□□ 0.6
GPC1P35052 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC1P35052 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GPC1P35052 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
GPC1P35052 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC1P35052 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GPC1P35052 PTBP1P-201ENST00000554374 1601 ntBASIC18.78■□□□□ 0.6
GPC1P35052 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC1P35052 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC1P35052 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC1P35052 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC1P35052 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC1P35052 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC1P35052 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.78■□□□□ 0.6
GPC1P35052 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
GPC1P35052 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC1P35052 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC1P35052 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.78■□□□□ 0.6
GPC1P35052 AL050303.2-201ENST00000619798 666 ntBASIC18.78■□□□□ 0.6
GPC1P35052 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC1P35052 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC1P35052 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC1P35052 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC1P35052 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC1P35052 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC1P35052 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms