Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm13534-201ENSMUST00000121169 513 ntBASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm9988-201ENSMUST00000069786 435 ntBASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tgds-204ENSMUST00000228543 1594 ntBASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms