Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 TFP1-202ENST00000475455 1573 ntBASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 FITM1-202ENST00000559294 800 ntBASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 AC026271.3-201ENST00000571884 352 ntBASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 AL445675.2-201ENST00000620291 557 ntBASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV17A0A0B4J275 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 TUBB8P6-201ENST00000436895 1288 ntBASIC18■□□□□ 0.47
TRAV17A0A0B4J275 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 LINC01568-207ENST00000641790 1380 ntBASIC18■□□□□ 0.47
TRAV17A0A0B4J275 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 FSCN1P1-201ENST00000568912 1481 ntBASIC18■□□□□ 0.47
TRAV17A0A0B4J275 AC018553.1-201ENST00000616682 1458 ntBASIC18■□□□□ 0.47
TRAV17A0A0B4J275 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV17A0A0B4J275 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV17A0A0B4J275 KRT18P22-201ENST00000402024 1347 ntBASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 KRT8P9-201ENST00000558927 1449 ntBASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 RN7SL850P-201ENST00000579959 291 ntBASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 AC092865.7-201ENST00000641832 219 ntBASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV17A0A0B4J275 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms