Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 MBP-206ENST00000397863 4800 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ABCF2P1-201ENST00000465687 1867 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC068044.1-201ENST00000441585 1978 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AL031595.3-201ENST00000624919 14262 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL137100.1-201ENST00000556703 1620 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 MTND5P11-201ENST00000511037 1812 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL359715.3-201ENST00000569267 2123 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL391666.1-201ENST00000442570 2764 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 UGT2B24P-201ENST00000514441 1597 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL356432.2-201ENST00000407841 422 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 RN7SKP127-201ENST00000410443 354 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL160175.1-201ENST00000428124 247 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AC007683.1-201ENST00000432746 591 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL590103.1-201ENST00000434488 307 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 RPL34P34-201ENST00000465389 354 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL121769.1-201ENST00000469473 401 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 MARK2P8-201ENST00000476069 952 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 RPL5P33-201ENST00000487833 905 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 RN7SL135P-201ENST00000490144 278 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 NDUFA5P12-201ENST00000503796 343 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AC021087.2-201ENST00000504656 1203 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 OSTC-204ENST00000512478 663 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 STMN2-203ENST00000518491 585 ntTSL 2 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 DEFB130C-202ENST00000530001 230 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 RN7SL311P-201ENST00000579858 306 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 MIR3689C-201ENST00000581239 72 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 JPT1-211ENST00000581874 517 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 MIR4314-201ENST00000583321 92 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AL159169.2-201ENST00000610061 1269 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 UBE2Q2P2-203ENST00000613592 761 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 AC127502.3-201ENST00000636170 1206 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 GTF2IP1-202ENST00000614592 2047 ntBASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.03□□□□□ -1.12
CUEDC1Q9NWM3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
CUEDC1Q9NWM3 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
CUEDC1Q9NWM3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CUEDC1Q9NWM3 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.12
CUEDC1Q9NWM3 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms